Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1476 ATGGTAAATGGTACTTGTTCTAGTCACAACGCTAAGGATGAGGAAAATAATAACAGGAGGGTGACGCGAAACAGCGAGAAGGGAAAAATCAAATCACATCGTAATGTATCAGATACAACTGGTGTCAGAAGGTCTCCTAGAGAGACATCATCGAAGAAGAACATTCCTAGCCCTTCTTCAAGTACCCGTAAGTCTGGGCGACTTGAAAATAGACCCCCACCAGCTCCTGTCAACAAAAGGAAATCTGAAAGGGTTGAAAAAAAAAAGCCAAGTCCTTTGAGAAGATCTGGAAGAACTAGGAGTCAGTCTTCTACCGGTTATTCTGATTCTAAAAGCTCAGGGTCAGTGAGTTCAGACCCTAAGCCAAAAAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCTAAGGAAGTGAATGGAACTGAGCAGCATGATCTGGGAACACCTCAGGTTAAAGTAAAGAGAATGAATGCTCGTATGTATCGGTCTCTCTTTCAATTACCAAAGGAAGAGCCTAATAGGATCGATAACTTAAATCAAGGTGGCAACAATGGTGGAGGCAAGATTGATGAGTGCTCTGGAGAGTGTCATGATTTTGAAGAAATCTCCAAGAATGGTGCGCTACCATCTGAAGATGGAAAATCAAAAGAGATGAGAGTTGACACTGGGTTGAGTGGGTCTGTGAAAGATCTGGTAGAAAATAACATGACTCTAGGTTCATTGGCACCATCTAATGTTGCACTACCATCCGAAGATGGCAAATCAAAAGAGATGAGAGTCGACACTGGGTTGAGTGGGCCTGTGAAAGATCTGGTAGAAGATACCATGACTCTAGATTCATTGGCACCATCTAATGCTGCAACTTATGAGACTGGTCTGGCACCTGAAAGCATTCACCCTGATTACTGCAGAGAGGAAACGTTACAGGTGTTAGTGTCAAGCAATTCCATATTGGATGAAGATTCTATCAGGAACAGTGTTGGGGATGATAGAGGTGAAAACTTGATACCTTCTAAGAGCAAGGAAATCACAGTGGATGTGGATTCCGATGTTTCTGCCATGTTGGCGAAGGGTGACAACTGCAACTTGACCCCTGATGCTAGTAGCCTGTCAAGGCTAGGTGGCTATATTATGGGGACTGACTGTCCATCTAATGCCACACTTTATGAGACTGGTTTGCTACCTGAAAGGGTTCAGCCTGATTGTTGCAGAGAAGAAACATTACCGTCAAGCAATTCCAAGAATGGTGTGCTACCATCTGAAGATGGCAAATCAAAAGAGACGAGAGTTGACTCTGGGTTGAGTGTGCCTGTGAAAGATCTAGTAGAAAATACCGTCACTCTCGGTTCATTGGCACCATCTACTGCTGCAACTTATGTGGCTAGTTTGGCACCTGAAAGCTTTCAGACTGATTACCGCAGAGAGAAAGGGAATTCCATATTGGATGAAGAAGACTTAATAAGTAACAGTGTAGGGCATGATAGTAGTGGTGAAACATTGGTACCTTCTAAGAGAAAGGGAATCATGGTTGACATGGATTCAGATGTTTCTGCCATGTTGGCTAAGGGCGATAACTGCAACTTGGTTCCTGATAGTGGTAGCCCTTCACAACTAGGTGGCAATATTATGGGGATTGATGGGTCATGTTCTAAGCGAATAAGGTCGGATTATAATCCTATAGACAGTGAGTCTTGTATCCCTTCTGCAACTGAGCTTCAAGATGGAGATTATATTGATGCAAGCATGCTGCAGAAGGATTCTCAAATCGATAATGAAAAAGAACCTGGTTTAATAAATAATTCCAATAACAGTGTTACTCAACTGAAGGAGAGGTTGTCAAGCCATATTGGATACAGATGCAAGTTAGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAATTCTTCGCTCCTCATCAAAGGTTGATAGTGTTGAGGCTGTTCGTGATGTTCTTATTTCTACCCGAAAGTGTTGTAGTCATCCCTATCTTGTTGGTCCGGAACTGCAACCTTCTCTTAACAAGGGTCTCAAACCAATTGAGTATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCAATGCTCGAGGAGTTGAGAAAGAATGATTTAAGGGTGGTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGGGTTATAGGAAATTATTTGGAAGACCTATTGCGACCAAAATTTGGTTCAGATTCGTATGAACGGATTGATAAAAGTCTTCCGCCTTCCAAGAAGAATGCCGCCATGAAGAAATTTAACGACAAGAACAACAAACGATTTGTGTTTTTGTTGGAAACATGTGCTTGCCTCCCAAGCATCAAGTTGTCATCAGTTGATTCTATAATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAGATCCCTTCAGAAAATAACACTTGATTCACAGTTTGAATTGATAAAAATTTTCCGTTTATATTCATCTTTCACTGTTGAAGAAAAAGCCTTAATCCTTTCTAAGCAATGTAAGATATTTGACATCAATTCTCCAAGCTGGACTACCTGTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGACAAATTGAAAGTTTTTCATGATGGTGAAACTTCTGCATCAAATGTGAAATCCTTGTTTGGACGACCACTTTTGAAAGAAGCAATGCATGAGTTCTCATCCCTACTATCTCAGGATGGAGAACATATTGAATCAAGCAACTTTTCAACTTTATTGGAAGTACAGCAAAATGGGGCAACATACCATGCAAATTCTTCTTTGCTTGGTGAGCTAAAACTTAGGGTACTGGGTGAAGAGCCACCCCAAATTTTTTGGACAAAACTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGAAGTCGGAAGAAAGTTCATCATTTTGATGGTTCAGTCAATAGGCCCGATCTTGTAAATGAAGGAGCAGCAAAGAAGCGCAGGAAAGTTAGTAACAATATTGTTGATCAGCTTTCAAAATCTGAAGACGAAAAGTTATCCAATGGAATCAAGGCAGATGGATCTCAAGGAAATAATGCTGAATCTGAGCAAAAAAGTGGACAGCATGATGAGCAGAGGAGCTTACTTCTCTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTCTTCCAGATAATGTCAAGAGAATGATTGATAATTTTCTTGAATATATTATGAGCAATCACGATGTCAATAGGGAACCGTTTTCAATATTACAGGCTTTTCAATTATCTCTGTGTTGGACTGCAGCTTCTTTGCTAAAACACAAACTTGACCCCATTGCTTCTCTTATACAAGATTTGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTGTTCTATGTTGCGTTGTTTGAAGAAAATATTTTTATATCGTACAGGAAATCATCATGATACCGGTTCTCCAAAAGCATCTGGACCATCAAACAGAGCATATTCCCGCACAGGAGTTGCACAAGTGGTTGAATTGTTCAAAAAAGATATGTCCAAAAGTATCAAAGAAATTCAGAAGAAGTGTGAAAAGAAGCTGAAGAAGCTACTTCTTTTGCAAGAGGAAGAGAAGCAAAGGTTGAGAGCAGCTATTGAGGAAGAAAAGGCTAAATTCGAGGAAAGGTACAAAATAGAGTCTGCTGTTATTCGATCCTGCTCTCCCAATGATGTTACAAGAATGGAAAAGCTCCGGGTTTTGAATACTGAATATGTAAAAGGAATTGAGGAATTAAAATTTCAGCATGATACATGTCTCAAGGATCTCAAGGACAAGCAATTAGCTGAAATACAGAAGTTTCAAGATAAGGAGGCCGCTTGGGTAAAAGATGTGAAATCTTGGGCAGACAAAGAATATCTAAACATAGTTGCTTCAGAGGAACTTGGAACTGGGGTTGAATCCTTGCAGACTTGTGATCAAGTAAAGCCTGACAATGGTCTAAAGAATCATTTGGCAGGTACTGCTGCGAAGCCTCCTTCATCCATGGAACAAAAATCTGATGGAGGTGTTGTAAATGAACTTTCAGATAGAGAATTAAGACTGAGTAATTGTCCAGATAACAATACCCTTTTGAGTCCACGGAACCAAAATTCTGGAGCCCCATCAAATATCCCAGGTTTAGATAGAGTTTTATCACCAAGGGCTTGTCAAGCTGCTAGTTCAAGTGATGGTCCGAATACAATTTCCTTTCCAAATCCCCTTTTGGAGCAACAAACTACCGATGGAGTCCCTTTGAGTATTCCAGCAGCAGCTGATTGTCGTGATGATATCGAGCATTTAACTAATGCTGTGTTGGGGGATAAAAGAATCACATCAGACCAGCAGAAAGGAGCACCTGAAACCATCACAGAATTGTCCCAGGGGACTCCAGTATCTAGAACAGTTAATGTCTTGGATCCTCCAGAACAAGTGCAGCAATTATCTGTGGGGTCCTCTCCTGACCATGATACATCTGGGGAAATGCATGTGCAACGATTACCTTCCGCAGAGCTCCCTTCTCATCTGGATTCAACTAATTTACCTTTGACAACCGAAATTGAACATCAGCCAACTGTGGTTCCTAATCAAGATGTGCAACCTGATTCAAATTTGGAACTCTATTCACATTCACATGAAGTTGTTGTGCATCCTGCCTCAAATTCAGATCCTAATACAGTTACACCAAGTGAAGTAAGAGTGCAATCTGCAGACACAATAAATTTGTCGATTCCTTTAGAGATCAATTATCAACATATGCAAGCTGAAACCCATTCAGCTTCCAGAATGCTGCATTTAAGCTATGATCCACTCAACAATGAATTGGATAGAATACAAAAAGTAACAGAGCAAACAATGAAAAACTATGAAGATAAGAAATTGCTGCTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGCAGGAAGTACGATATTAAATTTCAAGGAATTGAAGTTGAATTTAAACAAAGAAAGATGGCTCTGGAGACAAATCGGAATGTAGTTCATATGAATAAGTTCTTGGCAGATGCTTTTAGGTCTAAATGCTCGACTCTTAAATCATCTTGTACATCAGGAATGCTGCCAGATTCAGATATTGCACAGCAGCAGTTGCTTCAGCCTTCAAGACAACAAAGTGCTAGTTGGCGTTCCCTGGTTAATGGTTCTTCTTCCTGTGGACCTTCTGCTACCAGTCTGCAGAGTCCCTCCACAACGACTGGCTCTCAGCATATGGTAACACCTATACGGCCTGGTTACAGTGCATCAGTATTTCCCTCCAATGTTTCTGCAAGATCACCAATTATCAACACCATCTCTTTATCAGTTGGAAATCCTCAGGCTGGTGGTGGTCAGATACGAGCACCAGCCCCACATCTCCAGCCTTATAGACCATGA 5460 0.4042 MVNGTCSSHNAKDEENNNRRVTRNSEKGKIKSHRNVSDTTGVRRSPRETSSKKNIPSPSSSTRKSGRLENRPPPAPVNKRKSERVEKKKPSPLRRSGRTRSQSSTGYSDSKSSGSVSSDPKPKKEKSVKQLIFEAKEVNGTEQHDLGTPQVKVKRMNARMYRSLFQLPKEEPNRIDNLNQGGNNGGGKIDECSGECHDFEEISKNGALPSEDGKSKEMRVDTGLSGSVKDLVENNMTLGSLAPSNVALPSEDGKSKEMRVDTGLSGPVKDLVEDTMTLDSLAPSNAATYETGLAPESIHPDYCREETLQVLVSSNSILDEDSIRNSVGDDRGENLIPSKSKEITVDVDSDVSAMLAKGDNCNLTPDASSLSRLGGYIMGTDCPSNATLYETGLLPERVQPDCCREETLPSSNSKNGVLPSEDGKSKETRVDSGLSVPVKDLVENTVTLGSLAPSTAATYVASLAPESFQTDYRREKGNSILDEEDLISNSVGHDSSGETLVPSKRKGIMVDMDSDVSAMLAKGDNCNLVPDSGSPSQLGGNIMGIDGSCSKRIRSDYNPIDSESCIPSATELQDGDYIDASMLQKDSQIDNEKEPGLINNSNNSVTQLKERLSSHIGYRCKLVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLISTRKCCSHPYLVGPELQPSLNKGLKPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVVILFQSIGGSGRVIGNYLEDLLRPKFGSDSYERIDKSLPPSKKNAAMKKFNDKNNKRFVFLLETCACLPSIKLSSVDSIIIFDSDWNPMNDIRSLQKITLDSQFELIKIFRLYSSFTVEEKALILSKQCKIFDINSPSWTTCHMLLMWGASCLFDKLKVFHDGETSASNVKSLFGRPLLKEAMHEFSSLLSQDGEHIESSNFSTLLEVQQNGATYHANSSLLGELKLRVLGEEPPQIFWTKLLEGKQFQWKYLNSSSQRSRKKVHHFDGSVNRPDLVNEGAAKKRRKVSNNIVDQLSKSEDEKLSNGIKADGSQGNNAESEQKSGQHDEQRSLLLLLKPEIRKLCDVLLLPDNVKRMIDNFLEYIMSNHDVNREPFSILQAFQLSLCWTAASLLKHKLDPIASLIQDLNFECKKEEVDYICSMLRCLKKIFLYRTGNHHDTGSPKASGPSNRAYSRTGVAQVVELFKKDMSKSIKEIQKKCEKKLKKLLLLQEEEKQRLRAAIEEEKAKFEERYKIESAVIRSCSPNDVTRMEKLRVLNTEYVKGIEELKFQHDTCLKDLKDKQLAEIQKFQDKEAAWVKDVKSWADKEYLNIVASEELGTGVESLQTCDQVKPDNGLKNHLAGTAAKPPSSMEQKSDGGVVNELSDRELRLSNCPDNNTLLSPRNQNSGAPSNIPGLDRVLSPRACQAASSSDGPNTISFPNPLLEQQTTDGVPLSIPAAADCRDDIEHLTNAVLGDKRITSDQQKGAPETITELSQGTPVSRTVNVLDPPEQVQQLSVGSSPDHDTSGEMHVQRLPSAELPSHLDSTNLPLTTEIEHQPTVVPNQDVQPDSNLELYSHSHEVVVHPASNSDPNTVTPSEVRVQSADTINLSIPLEINYQHMQAETHSASRMLHLSYDPLNNELDRIQKVTEQTMKNYEDKKLLLKTDFEKELEELRRKYDIKFQGIEVEFKQRKMALETNRNVVHMNKFLADAFRSKCSTLKSSCTSGMLPDSDIAQQQLLQPSRQQSASWRSLVNGSSSCGPSATSLQSPSTTTGSQHMVTPIRPGYSASVFPSNVSARSPIINTISLSVGNPQAGGGQIRAPAPHLQPYRP* 1820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1476 1819 MobiDBLite consensus disorder prediction 987 1051 - -
Gso12g1476 1819 Coils Coil 1626 1646 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 987 1031 - -
Gso12g1476 1819 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 709 871 IPR001650 -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1335 1434 - -
Gso12g1476 1819 Gene3D - 622 852 IPR027417 -
Gso12g1476 1819 Coils Coil 1191 1237 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1470 1486 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 405 419 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1410 1434 - -
Gso12g1476 1819 Gene3D - 604 621 IPR038718 -
Gso12g1476 1819 Pfam Helicase conserved C-terminal domain 707 816 IPR001650 -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1376 1398 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1740 1766 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 404 431 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 12 50 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 96 117 - -
Gso12g1476 1819 Gene3D - 1622 1703 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 51 67 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 243 267 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 74 92 - -
Gso12g1476 1819 CDD SF2_C_SNF 704 816 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1467 1486 - -
Gso12g1476 1819 MobiDBLite consensus disorder prediction 1 127 - -
Gso12g1476 1819 PANTHER HELICASE PROTEIN MOM1 4 1819 IPR039322 GO:0031507
Gso12g1476 1819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 848 IPR027417 -
Gso12g1476 1819 PANTHER HELICASE PROTEIN MOM1 4 1819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1476 Gso-Chr12 37748114 37776348 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1476 - K11643 gmx:100781893 3486.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1476 12 37748114 37776348 Gso11g3366 11 49508913 49527601 GST
Gso12g1476 12 37748114 37776348 Gso12g0636 12 6021107 6033822 PCT
Gso12g1476 12 37748114 37776348 Gso11g1493 11 17384770 17397950 PCT
Gso12g0636 12 6021107 6033822 Gso12g1476 12 37748114 37776348 PCT
Gso11g1493 11 17384770 17397950 Gso12g1476 12 37748114 37776348 PCT