Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3366 ATGGTAAATGGTACTCGTTCTAGTCACAATGCTAAGGACGAGGAAAATAATAACAGGAGGGTGACACAGGATAGTGAGAAGGGAAAAATCAAATCACATCCTAATGTATCAGATACAACTGGTGTGAGAAGGTCTCCTAGAGAGACATCATCAAAGAAGAACATTCCTAACCCTTCTTCAAGTACCCGTAAGTCTGGGCGACTTGAAAATAGAGCACCACCAGCTCCTGTCGACAAAAGGAAATCTGGAAGGATTGAAAAAAAGATGCCAAGTCCTTTGAGAAGATCTGGAAGAACTAGGAGTCAGTCTTCTGCAGGTTATTCTGATTCTAAAAGCTCAGGGTCAGTGAGTTCAGACCCTAAGCCAAAAAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCTAAGGAAGTAAATGGAACTGAGGAACATCATCTGGGAACACCCCGGATCAGAGTAAAGAGAATGACTGCTCGTATGTATCGGTCTCTCTTTCAATTACCAAAGGAAGAGCCTAATAGGACCGATAAGTTAAATCAAGGTGGCAACAATGGTGAAGGCCAGATTGATGAGTGCTCTAAAGAGAGTCATGATTGTGAAGAAATCTCCAAGAATGGTGTGCTATCATCTGAAGATGGCAAATCAAAAGAGATGAGAGTTGACATTGGGTCGAGTGGGTCTGTGAAAGATCTGGTAGAAATTACCATGGCTCAAGGTTCATTGGCACCATCTAATGTTGCGCTACCATCTGAAGATGGAAAATCGAAAGAGATGAGAGTTGACACTGGGTTGAGTGGGCCTGTGAAAGATCTGGTAGAAAATACCATGACTCTAGATTCATTGGCACCATCTAATGCTGCAACTTATGAGACTGGTCTGGCATCTGAAAACTTTCACCCTGATTACTGCAGAGAGGAAACATTACAGGTGTTAGTGTCAAGCAATTCCATATTGGATGAAGATTCTATCAGGAACGGTGTTGGGGATCGTAGAGGTGAAAACTTGATACCTTCTAAGAGCAAGGAAATCACTGTGGATATGGATTCAGATGTTTCTTCCATGTTGGCGAAGGGTGACAATTGCAACTTGACTCCTGATGCTAGTAGCCTGTCAAGGCTAGGTGGCAATCTTATGGGGACTTACCGTCCATCTAATGCCACACTTTATGAGACTGGTTTGCTACCTGAAAGGGTTCAGCCTGATTGTTGCAGAGAAGAAACATTACCGTCAAGCTATTCCGAGAATGGTGTGCTACCATCTGAAGATGGCAAATCAAAAGAGGCGAGAGTTGACTCTGGGTTGAGTGTGCCTGTGAAAGATCTAGTAGACAATACCGTCACTCTAGGTTCATTGGCACCATCTACTGCCGCAACTTATGAGATTGGTTTGGCACCTGAAAGCATTCAGGCTGATTACCTCAGAGAGAAAGGGAATTCCATATTGGATGAAGAAGACTTAATTAGGATTAGTGTTGGGCATGATAGTAGTGGTGAAACATTGTTACCTTCTAAGAGAAAGGGAATCATGGTGGGCATGGATTCAGATGTTTCTGCCATGTTGGCTAAGGGCGATTACTGCAACTTGGTTCCTGATAGTGGTAGCCCTTCACAACTAGGTGGCAATATTATGGGGACCAACGGGTCATGTTCCAAGCAAATAAGGTTGGATTATAATCCTACAGTCAGGGAGTCTTGTATCCCTTCTGCAACTGAGCTTCAAGATGGACATTATATTGATGCAAGCATGCTGCAGAAGGATTCTCAAATTGATAATGAAAAAGAATCTGGTTTAATAACTAATTCCAATAGCAGTGCTACTCAACTAAAGGAGAGGTTGTCAAGTCATATTGGATACAGATGCAAATCTGACTCCTTTAGTTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAATTCTTCGCTCCTCATCAAAGGTTGATAGTGTTGAGGCAGTTCGTGATGTTCTTATTTCTACCCGAAAGTGTTGTAGTCATCCCTATCTTGTTGGTCCGGAACTGCAACCTTCTCTTAACAAGGGTCTCGAACCAATTGAGTATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCGATGCTTGAGGAGTTGAGGAAGAATGATTTAAGGGTGCTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGGGTTATAGGAAATTATTTGGAAGACCTATTGCGACCAAAATTTGGTTCAGATTCGTATGAACGGATTGATAAAAGTCTTCCGCCTTCCAAGAAGCATGCCGCCATGAAGAAATTTAATGATAAGAACAACAGACGATTTGTGTTTTTGTTGGAAACATGTGCTTGCCTTCCAAGCATCAAGTTGTCGTCAGTTGATTCTATAATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAGATCCCTTCAGAAACTAACTCTTGATTCACAGTTTGAATTGATAAAAATATTCCGTTTATATTCATCTTTCACTGTTGAAGAAAAAGCCTTAATCCTTTCTAAGCAATGTAAGATATTTGACATCAATTCACCAAACTGGACTATCTTTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGACGAATTGAAAGTTTTTCATGATGGTGAAATTTCTTCATCAAATGTGAAATCCTTGTTTGGGCAACCACTTTTGAAAGAAGCAATGCATGAGTTCTCATCCCTACTATCTCAGGATGGAGAACATATTGATTCAAGCAACTGTTCAACTTTATTGAAAGTACAGCAAAATGGGGCAACATACCATGCAAATTCTTCTTTGCTTGGTGAGCTAAAATTTAGGGTACTTGGTGAAGAGCCAACCCAAATTTTTTGGACAAAGCTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGAAGCCGGAAGAAAGTTTATCATTTTGATGGTTCAGTCAATGGGCCTGATCTTGTAAATGAAGGAGCATCAAAGAAGCGCAGGAAAATTAGCAACAATATTGTTGAACAGCCTTCTTCAAAATCTGAAGATGAAAAGTTATCCAATGGAATCAAGGCAGGAACATCTGAAGATTTATTGGATAGATCTCAAGGAAATAATGCTGAATCTGAGCCAAAAAGTAGACAGCATGATGAGCAGAGGAGCTTACTTCTTTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTCTTCCAGATAACGTCAAGAGAATGATTGATAATTTTCTTGAATATGTTATGAACAATCACGATGTCAATAGGGAACCGTTTTCAATATCACAGGCTTTTCAATTATCTCTGTGTTGGACTGCAGCTTCTTTGCTGAAACACAAACTTGACCCCATTGCTTCTCTTATACAAGATTTGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTGTTCTATGTTGTGTTGTTTGAAGAAAATATTTTTATACCGTACAGGAAATTATCATGATACCGGTTCTCCAAAAGCATCTGGACCATCAAACAGGGCATATTCCTGTACAGGAGTTGCACGAGAGGTTGAATTGTTCAAAAAAGATATGTCCAAAAGTATTAAAGAAATTCAGAAGAAGTGTGAAAAGAAGCTGAAGAAGCTACATATTTTGCAAGAAGAAGAGAAGCAAAGGTTGAGAGCAGCTATTGAGGAAGAAAAGGCTAAATTTGAGGAAAGGTACAAAATAGAGTCTGCTGTTATTCGATCCTGCTCTCCCAATGATGTTACAAGAATGGAAAAGCTCAGGGTTTTGAATACTGAATATGAAAAAGGAATTGAAGAACTAAAATTTCACCATGATTCATGTCTCAAGGATCTTGAGGACAAGCAATTAGCTGAAATACAGAAGTTTCAAGATAAGGAGGCTGCTTGGGTAGAAGATGTGAAATCTTGGGCCGACAATGAATATCTAAGCATAATTGCTTCAAAGGAACTTGGAACTGGGGTTGAATCCTTGCAGACTTGTGATCAAGTACTGCCTGACAGTGGTCTAAAAAATCATTTGGCTGGTACTGCTGCGAATCCTCCTTCATCCATGGAACAAAAATCTGATGGAGGTGCTGTAAATGAACTTTCAGATAGAGAATTAAGACTGAGTAATGGTCCAGATAACAATACCCTTTTGAGTCCACAGAACCAAAATTCTGGGGGCCCATTAGATGTCCAAGGTTTAGATAGAGTTTTATCACCAAGGGCTTGTCAAGCTGCTAGTTCAAGTGATGGTCCGAATACAATTTCCATTCCAAATCCACTTTTGGAGCAACAAACTACCAACGGAGTCCCTTTGAGTATTCCAGCAGCAGTTGATTTTCATGATGATATAGAGCATTTAACAAATGCTGTGTTGGGGGATAAAAGAACCACATCAGACCAGCAGGAAGGAGCACCTAAAACCATGACAGAATTGTCCCAGGGGACTCCAGTATCTAGAACAGTTAATGTCACGGATCCTCCAGAACAAGTGCAGCATTTATCTGTGGAGTCCTCTCCTCACCATGATATATCTGGGGAAATGTTGCATTCTTCCAGACAACCTGAACTGTTATCTAGTGCAGTTGATGTTGCACCCGCTGATCAATCCAATCATGTTTCACTGATCGTGAAGCCTGTGGAGCAGGTGCAACAAGTATCATCTGCAGAGCTCCCTTCTTCCCATCTGGATTCAACTAATTTACCTTTCACAACCGAACTTGAACATCAGCCAACTGTGGTTCCAAATCAAGACGTGCAACCTGATTCAAATTTGGAAGTTGATTCACATTCTCATTCACATGAAGTTTTTGTGCACCCTGCCTCAAATTCAGACCCTAATACAGTTACACCTAGTGAAGTAAGAGTGCAATCTGCAGACACAACAAATTTGTCGACTCCTTTGGAGATAAATTATCAAAATATGCAAGCTGAAACCCATTCATCTTCCAGAATGGTGCATTTAAGCTATGATCCGCTCAACAATGAATTGGATAGAATACAAAAAGTAACAGAACAAGCAGTGAAAAACTATGAAGATAAGAAATCGCAGTTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGTAGGAAGTATGATGTTAAATTTCAAGGAATTGAAGTTGAATTTAAACAAAGAAAGACGACTCTGGATACAAATCGTAATGTAGTTCATATGAATAAGTTCTTGGCAGCTGCTTTTAGGTCTAAATGCTCGACTCTTAAACCATCTTGTACATCAGGAATGCTGCCAGATTCAGGTTTCGCACAGCAGCAGTTGCTTCAGCCTTCAAAACAACAAAGTACTAGTTGGCGTTCCCTGCTTGCTGGTTCTTCTTCCTCCACCACGACTAGCTCTCAGCATATGGTAACACCTATACGGGCTGGTTACAGTGCATCAGGATTTTCCCACAATGTTTCTGCAAGATCACCAATTATTGACACCATTTCTTTGCCAGTTGGAAATCCTCAAGCTGGTGTAGGTCAGATACGAGCACCTGCACCACATCTCCAGCCTTATAGACAATGA 5574 0.4017 MVNGTRSSHNAKDEENNNRRVTQDSEKGKIKSHPNVSDTTGVRRSPRETSSKKNIPNPSSSTRKSGRLENRAPPAPVDKRKSGRIEKKMPSPLRRSGRTRSQSSAGYSDSKSSGSVSSDPKPKKEKSVKQLIFEAKEVNGTEEHHLGTPRIRVKRMTARMYRSLFQLPKEEPNRTDKLNQGGNNGEGQIDECSKESHDCEEISKNGVLSSEDGKSKEMRVDIGSSGSVKDLVEITMAQGSLAPSNVALPSEDGKSKEMRVDTGLSGPVKDLVENTMTLDSLAPSNAATYETGLASENFHPDYCREETLQVLVSSNSILDEDSIRNGVGDRRGENLIPSKSKEITVDMDSDVSSMLAKGDNCNLTPDASSLSRLGGNLMGTYRPSNATLYETGLLPERVQPDCCREETLPSSYSENGVLPSEDGKSKEARVDSGLSVPVKDLVDNTVTLGSLAPSTAATYEIGLAPESIQADYLREKGNSILDEEDLIRISVGHDSSGETLLPSKRKGIMVGMDSDVSAMLAKGDYCNLVPDSGSPSQLGGNIMGTNGSCSKQIRLDYNPTVRESCIPSATELQDGHYIDASMLQKDSQIDNEKESGLITNSNSSATQLKERLSSHIGYRCKSDSFSFVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLISTRKCCSHPYLVGPELQPSLNKGLEPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVLILFQSIGGSGRVIGNYLEDLLRPKFGSDSYERIDKSLPPSKKHAAMKKFNDKNNRRFVFLLETCACLPSIKLSSVDSIIIFDSDWNPMNDIRSLQKLTLDSQFELIKIFRLYSSFTVEEKALILSKQCKIFDINSPNWTIFHMLLMWGASCLFDELKVFHDGEISSSNVKSLFGQPLLKEAMHEFSSLLSQDGEHIDSSNCSTLLKVQQNGATYHANSSLLGELKFRVLGEEPTQIFWTKLLEGKQFQWKYLNSSSQRSRKKVYHFDGSVNGPDLVNEGASKKRRKISNNIVEQPSSKSEDEKLSNGIKAGTSEDLLDRSQGNNAESEPKSRQHDEQRSLLLLLKPEIRKLCDVLLLPDNVKRMIDNFLEYVMNNHDVNREPFSISQAFQLSLCWTAASLLKHKLDPIASLIQDLNFECKKEEVDYICSMLCCLKKIFLYRTGNYHDTGSPKASGPSNRAYSCTGVAREVELFKKDMSKSIKEIQKKCEKKLKKLHILQEEEKQRLRAAIEEEKAKFEERYKIESAVIRSCSPNDVTRMEKLRVLNTEYEKGIEELKFHHDSCLKDLEDKQLAEIQKFQDKEAAWVEDVKSWADNEYLSIIASKELGTGVESLQTCDQVLPDSGLKNHLAGTAANPPSSMEQKSDGGAVNELSDRELRLSNGPDNNTLLSPQNQNSGGPLDVQGLDRVLSPRACQAASSSDGPNTISIPNPLLEQQTTNGVPLSIPAAVDFHDDIEHLTNAVLGDKRTTSDQQEGAPKTMTELSQGTPVSRTVNVTDPPEQVQHLSVESSPHHDISGEMLHSSRQPELLSSAVDVAPADQSNHVSLIVKPVEQVQQVSSAELPSSHLDSTNLPFTTELEHQPTVVPNQDVQPDSNLEVDSHSHSHEVFVHPASNSDPNTVTPSEVRVQSADTTNLSTPLEINYQNMQAETHSSSRMVHLSYDPLNNELDRIQKVTEQAVKNYEDKKSQLKTDFEKELEELRRKYDVKFQGIEVEFKQRKTTLDTNRNVVHMNKFLAAAFRSKCSTLKPSCTSGMLPDSGFAQQQLLQPSKQQSTSWRSLLAGSSSSTTTSSQHMVTPIRAGYSASGFSHNVSARSPIIDTISLPVGNPQAGVGQIRAPAPHLQPYRQ* 1858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3366 1857 MobiDBLite consensus disorder prediction 407 431 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1004 1066 - -
Gso11g3366 1857 Gene3D - 1671 1752 - -
Gso11g3366 1857 Gene3D - 600 626 IPR038718 -
Gso11g3366 1857 Gene3D - 627 857 IPR027417 -
Gso11g3366 1857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 628 854 IPR027417 -
Gso11g3366 1857 Pfam Helicase conserved C-terminal domain 712 821 IPR001650 -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 73 93 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1362 1376 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1423 1442 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1475 1502 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1 130 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 165 223 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 190 219 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 51 67 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 243 267 - -
Gso11g3366 1857 PANTHER HELICASE PROTEIN MOM1 4 1856 IPR039322 GO:0031507
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1357 1442 - -
Gso11g3366 1857 Coils Coil 1682 1713 - -
Gso11g3366 1857 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 714 876 IPR001650 -
Gso11g3366 1857 PANTHER HELICASE PROTEIN MOM1 4 1856 - -
Gso11g3366 1857 Coils Coil 1204 1250 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 1389 1410 - -
Gso11g3366 1857 CDD SF2_C_SNF 709 821 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 95 117 - -
Gso11g3366 1857 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3366 Gso-Chr11 49508913 49527601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3366 - K11642 gmx:100810773 3551.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1476 12 37748114 37776348 Gso11g3366 11 49508913 49527601 GST
Gso11g3366 11 49508913 49527601 Gso12g0636 12 6021107 6033822 PCT
Gso11g3366 11 49508913 49527601 Gso11g1493 11 17384770 17397950 PCT
Gso12g0636 12 6021107 6033822 Gso11g3366 11 49508913 49527601 PCT
Gso11g1493 11 17384770 17397950 Gso11g3366 11 49508913 49527601 PCT