Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1493 ATGGCGAACGACACTGGTTCCGGTCGCGTCGTCACAGAGAAAGGACTGGCTACGAGGTCTTCGAGAGAGACATTAGGGAAGAATGCGCTTGCGAGCGGTTCCGCCACGAACGCCACTCCGAATCGCAAGTCGGAACGGCTCGAGAAGCGGACGCCGCCGTCGCTCTCGGCGAGAATCACGGTGAGATTCGGTCAGAAGACGCCGAGTCCGTTGCGGAGATCTGAGAGAACGAAGAACGCTTCTCCTTCTCCTTCTTCGGATCCTTCGGCTTCGAAATCCAAGAGTTCGGGTTCGAAGAGCAATTGCAGTGGGAAACAGTTGGCGTTTGAGGCTAGCGCTGACGAAGATGATGATGATGAGAAAAGTGGCGCGGAAGCTTCTTCGAGACTTAGACCTAAGAGAATGACTGCGGGCGAGTATCGTGCTCTCTTTGTTAAACCTAAGATAGATTGCAATGAGAAGACAAATGGGATGGATAGGTCAACTGAAGGAGATTGCCATGAGAAGACAAATGGAATGGATAGGTCAACTCAAGAAGATTGCCATGAGAAGCCAAATGGGATGAATAGATCAACTCAAGAAGATTGCCATGATAAGACAAATGGGATGTATAGGTCAACTCAAGAAGATTGCCATGAGAAGTCAAATGGGGTGGATATGTCAGCTCAGGAAGGTGATGACGGGGCTAGGGACAAGATTGACGTGTGCCTTAAAGAGAATTGTTTTGATTCTGCCAGGGATGATAAGGATATTCTTCTACCTGAAGATGCCAATAGTAAAGAGATGAGAGCTGAGTCTAAGTTGAGTGGGCCTTTGAAAGAACTATTAGATAATAATGCGACTCTAAATTCATTGGTACCGTCTAATGCTGCAACCTGTGAGCCGCCCAGTGGGGCGTCTGAAAGGGTTCAGTCTGAATCGTGCATGGAGGAGACATCACAGAAGTCAGGGTCAAGGGATTCCATAATAAATGAAAATTTGATTAGGAAATGTGTTGAGAATGATAAGGGTGAAAAATCAATATCTTTGAAGAGAAAAAAAAATATGTTGGACATGCATTCAGATGCTTCTGCTATGTTGGTTGACAATAACATCAGCAACTTGATTGAGGATGCTCACCCATCAAGGATATGTGGCAATGTTGTGGAGACCAGCGGGTCATGTTCCAAAAGGATAAGGCGTATCTCCTTATCAGAATCAGATGTGAAAAAGGGTGGGAGGAAAACTGCCAATAATGTTGATCAGCCTTCTTCAAAATCTAATGGTGAAAATTTATCTACTAGGAACAAGGAAGGAAATTCTGGAGATTCAGTGGACCCAGAGATACCTCAAGGGAACACTGTTGAAACAGAGAAAATACGAAAACAGCAGAGGAGCTTACATCTTTTACTGAAGCCAGAGATAGCAAATCTTTGTGAAATTCTGCATCTGCCTGAAAATGTCAAGAGTATGGTTGAAAATTGTCTTGAATATACTATGAACAATTACCAGATCTGTACAGAACCAGTGTCAATATTACAGGCTTTTCAACTATCTCTGTGTTGGACTGCTGCTGCTTTGCTAAATCACAAACTTGACTTTGAAGAGTCCCTCATGCTTGCTAAGCAGAACTTGAATTTTGACTGCAAGAAGGAAGTGGTGGATGAAATTAATTCAAGACTCTGGGATCTGAAGGAATTTTTTTTAAAACTCACAGGAAACTCTAATGTTGCCAGCTATCCAAAAGCTTCTGAGTCATCAAATGGGGTTTATTCATTTATTGAAGAGACACCAGAGGTTGAATTAGTAAAAAATGACAATTCTAAAAATATTAAAAACGTTCAGAAGAGTAAAAGCCAGTGGAATAAGCTACTTCTGACACAACAAGAAGAGAAGCAAAAGTTGAAAAAAGATATTGAAAATGAAAATGGTGAATTTTGGAGAAGGTACCGAATACACAGGGCAGCTATTCAATCATGTTCTCCCAATGATGTAACCAAAGAGCAAAAGCTCAAGGTTTTCAACAGTGAATACATGAAAATAATTAGAGAATTGGAAAGGCAGCATGAGATATGTCTCAAGGATCTTGAGGACAAGCAATTAAAAACAAGGCTGACATTCCAAGAGATTTCAGCACCTGATGAATTGATAAACCCAGTTACTTCAAACAAATCTGGGACTAAGGTTGACCAGACTTGTGATCAAGCCCAGCATTCTAATGCTCCGAAAGACCTTGTGTCTGATCATGTTGTCGAAGGAGAGGGTTTCAATGATATAGTTGAAATCATGACAAGGACTGGAACTGGGATTGGATTATCTGAAGCTCCTGATGCCAATGCCTCTGTAGTTGTACCATGCAGTAGCACAGTTGAACTGCAAACTCCTCTGGTCAAACATGCTTATGCTAATGAGATGGACATAGTGGCTTCAAAAGATGGACCAGTATCTGGAAATAAGTGCTATAATGTTGCTGAAAATGAATATGATAGTCAAGGAAATATTTTCTCTAAGCATTACAATTCCAGAGAACAATGTTCTGATGGAGCTATTAGCTCGCCAGAGGAGGGGGAGTTTGTAAATTATAGTTGTGAATCTCATGATTTTTGGAAGGATGCTATAACACAAGTTCTGCCTTCATCTAATGAAGAGATATGTGATGGGATAACATTAGATATTCAATGTTCTGATGGAGCTATTAGCTCGCCAGAGGATGGGGAGTTTGTAAATTATAGTTCTGAATCTCATGATTTTGGGCAGGATGCTATGACACAGGTTCTGCTTTCATCTAATGAAGAGATGTGTGATTGGAAAACATTAGATGTTCAGCGTTCTGATGGAGCTATTAGCTTGCCAGAGGAGGGGGAGTGTATAAATTATAGTTGTGAATCTCATGATTTTGGGCAGGATGCTATAGCCCAAGTTCTGCCTTCATCTAATGAAGAGATATGTGATGGGAAAACATTAGATGTTCCCTGTGGAGAGGTGTCTCCTACAGGGTGTAACACCAGCAGTTCAAATGGTGATCATGTTGAAATTCCTTCTTCTAGGCAAGGGGAACTTGATGGGACTATACTGAGCAATCCTGTTTGTGGTTCATCAATAGAGGTTGGGGCTAATGGTTCCAATGATGGTGCAAAGAATATGGCACCCTTGAATTCTCAATCATCTGAAGAACATATCCCATGTGTAAATACCATATCCACACCAAATTGTGAGAATGCTGCACAAATCCATGAGGCTGATGACAATAATGGTTCAAAAAATGCTGAAACTCTGAACTCATCTTTGTCTGATGAAAGAATTTCCTCCTTGAATTCAAAATCACCTCAAGACCATGTCCGTAATGAAAATGCCATGTGCATGCAAAATTGTGAGAATTTTGCACCGAGCCTTGAGGATGATGACGGTGATGGTTCAACTATTGTCATTCCAAATCCACCTTTGATTGATGAGAGAAATGCTGATAGGACCATAGTATTAAATAGAGATGCACATGTGGGAATGCTTGAGACTGTCAATCTCACTCCATCCACAGAGCAAATATCTGGAGGTGCAGTAGATGAAGATGGTCTCCCCAACCACATTCCCAAGTCATCAGTTTTAGATAGTGTATTGTCCAGACGACGCGAAGCTGATAGTCCTAGTAATAGCTCGGATGCTGATTGTATTATTCTTTCAAATCAACCTTCTTTAGAGAAACAAAATCATGAAGTCTTATCAAACATACCTGTTGGACAAATTCCAGTTGAAGTGTCAGACACTTGTCATGAGAGGATTACTGTAAATGTATTAGATGGGGAGGAAGCTGTGGGAAGGCCTGCCACAGTCAATTGTACTGATTATCCTGAGAATATAATTCCTCTGAATTCTTCATCCATGGATCAAATATCTAATGGAGGTCCATTATTAGATGGAGATTTATCATCAGGGCCTTGTGCTACTAGCCCAGGCAATGGTCTGACCCTACCTGATGAACAAATTCCTGTCTTAGTGCCAGAAAATAGCGATAAAGTGGCTCGATGTCAATTAACAGACAGTGCAGTGGTGAAGAAAAATGCCATATCTGACCAGCAGGAAGGAGTATGTAGAACCATGACAGAAAACAGTTTATCCCAGGAGACTCCAGTATCGAGAACAGTTCATGATCTCATGGAGCCTCTAGAACCACTGCAATCATTATCATCTGTAGAGTCTCCACCTGACCCGGATACTGCTAGAGAAATGCCGAACACTTTGATATCTAGTCCTGTTGATATTGTACCTGATAATCAATCCATTAATGTTTCACTGGTCATGGAGCCTCCAGAGCAGGAGGGGCAATTACTTTCTGCAGGTTTCCTTTCTTCCAACCAGGACCTATCTAATTTGCCTTTGGTGACTGGAAACAAAGACCAGCCATCCGATGAAGATGATCTCCCCTATCACATTTCTGAGATTCAAAATCAAGTTGTGCAACAAGCCTCATATTCGGACCAGCAGGAAGGAGCATGTAGAACCGTGACAGAAAACAGTTTGTCCCTAGAGACTCCAGTATCTAGACCAGTTGATGATCTCATGGAGCCTCTAGAACAAGTGCAACCATTATCATCTGTAGAGTCTCCACCTGACCGTGATACTGCTAGAGAAATGCAGAACATTTTGGTATCTAGTTCTGTTGATTTTGTACCAGACAATCAATCCATTAATGATTCACTGGTCATGGAGCCTCCAGAGCAGGAGGGGCAATTACCTTCTGCCGGTATCCTTTCTTCCAACCAGGACCTAGCTAACTTGCCTTTGGTGACTCGAACTGAAGACCAGCCATCCAATGAAGATGGTATTTCCAACCACATTCCCGAGACATCAATTGAGATTCAAAACCAAGCTGTTGGGCAATGTGCCTCAAATGTGGAACTTGACTCATGTTCTCGTCAAGTTGTACATCCAGCCTCAAATATGGACCTTGATTCACTTCTTCCTGGTGGATTCAGACGGCAGTCTTCAGACACAAGAAATTTGTCAACTCTCACAGAGAATAATAGCCATCCTGTACAACCTGCTAGCCAATCAGCTTCCAGGATTATTCGACATTTGTGCCTTGATCCACTTACCAATGAATTAGAAAGACTGCGTATACTGACAGACCAAAATATGAAAGAATATGAAAACAAGAAATTGCAGTTGAAATGTGATTTTGAGAAGGAACTCGAGGAACTTTACAGGAAGTATGACATTAAACGTAAGGAGATTGAGGTTGAATTTCAGAATATAAGGAAGAACCTGGATACACGAAATAAAATAGTTTTTGTAAATAAGATATTGGCTGAGGCTTTCAGGGCTAAATCCATGGATCTTAAAGTATCTGGTGCATCAAGAATGCAGCAAGATGCAAGTGTTCCAATGCAATTATTTCAGCTTGCAAGTCAGCAAAATGCCACTCAGCCCTGTCTGGTTGGTGCATCATCTTGTGGGCCTCCTGCAGCCAGCGTGCAGAGTTCCTACGCCACAACTACCACTCAGACTATGGTATCACCAATACAGGCCACTTACAGTACACCAGGAACTTTCTCCAGTGTTTCTCCAAGACTACCTCATATCAACTCCCTCTCTTCACCCTTGGGAAATGTTCAAACTGCCGGGGAGATACGTGCCCCTGCACCACATCTCCAGCCTTATAGACCCCCAACATCCATCCCAGCCTCCAGTCCATGTACAGTTCCGCATGGGAGGCCAGGTCAGCCTACACCCGGTAATATTCCGGTAACTTCTCCCCCATTTTCTCACCGGACACCCCGGCCAATGCCCGCAAACTTTCAGTCTGTTCCTCATAGGGGGCATTGGCCCGTAAGTACAAGTGGGTTATCCACACCTAATTTATCTGCTGCCATGAATTCTCGTGGTGATGCTAATAGTCAACCTGGTATAAATCTGGCAAATGTTCGGCCACATATGCCAGATTTGCCTACATTGATGAACTTGAACCTATCCAAATTTGGCTGTAATAGCTCGCCGGCTAACTCAGCACATCAAGCTACATCACCTGATGTAGTCTGTTTATCAGATGATGAATGA 6030 0.4249 MANDTGSGRVVTEKGLATRSSRETLGKNALASGSATNATPNRKSERLEKRTPPSLSARITVRFGQKTPSPLRRSERTKNASPSPSSDPSASKSKSSGSKSNCSGKQLAFEASADEDDDDEKSGAEASSRLRPKRMTAGEYRALFVKPKIDCNEKTNGMDRSTEGDCHEKTNGMDRSTQEDCHEKPNGMNRSTQEDCHDKTNGMYRSTQEDCHEKSNGVDMSAQEGDDGARDKIDVCLKENCFDSARDDKDILLPEDANSKEMRAESKLSGPLKELLDNNATLNSLVPSNAATCEPPSGASERVQSESCMEETSQKSGSRDSIINENLIRKCVENDKGEKSISLKRKKNMLDMHSDASAMLVDNNISNLIEDAHPSRICGNVVETSGSCSKRIRRISLSESDVKKGGRKTANNVDQPSSKSNGENLSTRNKEGNSGDSVDPEIPQGNTVETEKIRKQQRSLHLLLKPEIANLCEILHLPENVKSMVENCLEYTMNNYQICTEPVSILQAFQLSLCWTAAALLNHKLDFEESLMLAKQNLNFDCKKEVVDEINSRLWDLKEFFLKLTGNSNVASYPKASESSNGVYSFIEETPEVELVKNDNSKNIKNVQKSKSQWNKLLLTQQEEKQKLKKDIENENGEFWRRYRIHRAAIQSCSPNDVTKEQKLKVFNSEYMKIIRELERQHEICLKDLEDKQLKTRLTFQEISAPDELINPVTSNKSGTKVDQTCDQAQHSNAPKDLVSDHVVEGEGFNDIVEIMTRTGTGIGLSEAPDANASVVVPCSSTVELQTPLVKHAYANEMDIVASKDGPVSGNKCYNVAENEYDSQGNIFSKHYNSREQCSDGAISSPEEGEFVNYSCESHDFWKDAITQVLPSSNEEICDGITLDIQCSDGAISSPEDGEFVNYSSESHDFGQDAMTQVLLSSNEEMCDWKTLDVQRSDGAISLPEEGECINYSCESHDFGQDAIAQVLPSSNEEICDGKTLDVPCGEVSPTGCNTSSSNGDHVEIPSSRQGELDGTILSNPVCGSSIEVGANGSNDGAKNMAPLNSQSSEEHIPCVNTISTPNCENAAQIHEADDNNGSKNAETLNSSLSDERISSLNSKSPQDHVRNENAMCMQNCENFAPSLEDDDGDGSTIVIPNPPLIDERNADRTIVLNRDAHVGMLETVNLTPSTEQISGGAVDEDGLPNHIPKSSVLDSVLSRRREADSPSNSSDADCIILSNQPSLEKQNHEVLSNIPVGQIPVEVSDTCHERITVNVLDGEEAVGRPATVNCTDYPENIIPLNSSSMDQISNGGPLLDGDLSSGPCATSPGNGLTLPDEQIPVLVPENSDKVARCQLTDSAVVKKNAISDQQEGVCRTMTENSLSQETPVSRTVHDLMEPLEPLQSLSSVESPPDPDTAREMPNTLISSPVDIVPDNQSINVSLVMEPPEQEGQLLSAGFLSSNQDLSNLPLVTGNKDQPSDEDDLPYHISEIQNQVVQQASYSDQQEGACRTVTENSLSLETPVSRPVDDLMEPLEQVQPLSSVESPPDRDTAREMQNILVSSSVDFVPDNQSINDSLVMEPPEQEGQLPSAGILSSNQDLANLPLVTRTEDQPSNEDGISNHIPETSIEIQNQAVGQCASNVELDSCSRQVVHPASNMDLDSLLPGGFRRQSSDTRNLSTLTENNSHPVQPASQSASRIIRHLCLDPLTNELERLRILTDQNMKEYENKKLQLKCDFEKELEELYRKYDIKRKEIEVEFQNIRKNLDTRNKIVFVNKILAEAFRAKSMDLKVSGASRMQQDASVPMQLFQLASQQNATQPCLVGASSCGPPAASVQSSYATTTTQTMVSPIQATYSTPGTFSSVSPRLPHINSLSSPLGNVQTAGEIRAPAPHLQPYRPPTSIPASSPCTVPHGRPGQPTPGNIPVTSPPFSHRTPRPMPANFQSVPHRGHWPVSTSGLSTPNLSAAMNSRGDANSQPGINLANVRPHMPDLPTLMNLNLSKFGCNSSPANSAHQATSPDVVCLSDDE* 2010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1493 2009 MobiDBLite consensus disorder prediction 152 227 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 17 41 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 289 320 - -
Gso11g1493 2009 Coils Coil 611 638 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1872 1916 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 991 1013 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1553 1572 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1 139 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 410 444 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1072 1104 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 991 1005 - -
Gso11g1493 2009 PANTHER HELICASE PROTEIN MOM1 1474 1533 IPR039322 GO:0031507
Gso11g1493 2009 PANTHER HELICASE PROTEIN MOM1 1401 1480 IPR039322 GO:0031507
Gso11g1493 2009 PANTHER HELICASE PROTEIN MOM1 1537 2009 IPR039322 GO:0031507
Gso11g1493 2009 PANTHER HELICASE PROTEIN MOM1 1 1398 IPR039322 GO:0031507
Gso11g1493 2009 Gene3D - 1686 1767 - -
Gso11g1493 2009 PANTHER - 1 1398 - -
Gso11g1493 2009 PANTHER - 1537 2009 - -
Gso11g1493 2009 PANTHER - 1474 1533 - -
Gso11g1493 2009 PANTHER - 1401 1480 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1649 1674 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1988 2009 - -
Gso11g1493 2009 Coils Coil 1704 1739 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 74 107 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 399 451 - -
Gso11g1493 2009 Coils Coil 675 695 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 122 136 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1895 1916 - -
Gso11g1493 2009 MobiDBLite consensus disorder prediction 1644 1674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1493 Gso-Chr11 17384770 17397950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1493 - - gmx:100813071 3942.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1493 11 17384770 17397950 Gso11g1493 11 17384770 17397950 ECH
Gso12g0636 12 6021107 6033822 Gso11g1493 11 17384770 17397950 GST
Gso12g1476 12 37748114 37776348 Gso11g1493 11 17384770 17397950 PCT
Gso11g3366 11 49508913 49527601 Gso11g1493 11 17384770 17397950 PCT
Gso11g1493 11 17384770 17397950 Gso12g1476 12 37748114 37776348 PCT
Gso11g1493 11 17384770 17397950 Gso11g3366 11 49508913 49527601 PCT