Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1472 ATGGAGAAAGAAACAGAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTCTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGTTATAAGGACGCTGCTATTGAGCTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTAGTATATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAGGGTGGTCGCCATGTAACTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAAACATGCACCAAAGGAAAGCTGAGATGGCTAAGCGCTCTGATGCCTTCATTGCCTTACCCGGTGGCTATGGGACACTTGAAGAACTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACCTTTTTGTCTTTTATTGACAAAGCGGTGGAGGAAGGCTTCATCAGCCCCACTGCTCGCCATATAATTGTATCTGCCCCAACACCAAAAGAGCTTGTCAAAGAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGTCTCTAAGCTAAGCTGGGAAAGTGAACAGCTACATTAG 630 0.4524 MEKETEMKQSKFKRICVFCGSSPGNKTSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVTGVIPKTLMPRELTGETVGEVKAVANMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKLSWESEQLH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1472 209 Gene3D - 2 189 - -
Gso12g1472 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Gso12g1472 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Gso12g1472 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Gso12g1472 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Gso12g1472 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1472 Gso-Chr12 37666060 37671169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1472 K22522 - gmx:100780273 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1472 12 37666060 37671169 Gso11g3370 11 49567479 49572007 GST
Gso12g1472 12 37666060 37671169 Gso12g0629 12 5910797 5916374 PCT
Gso12g1472 12 37666060 37671169 Gso11g1499 11 17490951 17496947 PCT
Gso12g0629 12 5910797 5916374 Gso12g1472 12 37666060 37671169 PCT
Gso11g1499 11 17490951 17496947 Gso12g1472 12 37666060 37671169 PCT