Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0629 ATGATAGAGAAGAAGACACAGTGTGAGAAAAAGGAAAAAATGGAAGGTGAAGAAACTGAGATGAAACAACAATCCAGGTTCAAAAGGATTTGTGTGTTCTGTGGCAGCAGCCCTGGGAACAAGAGTAGCTATAAGGACGCTGCTATTGAGCTTGGGAAAGAGTTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGAAGCATTGGTTTGATGGGGTTGGTTTCCCAGGCTGTTTATGAAGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTGATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTGATGGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTAAGCACTCTGATGCCTTTATTGCCTTGCCCGGTGGCTATGGGACTCTTGAGGAGCTTCTAGAGGTGATAACTTGGGCTCAGCTTGGCATCCATGATAAACCGGTGGGGTTGCTGAATGTAGATGGATACTACAATTCCTTGTTGTGTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATTGTATCTGCCCCATCAACAAAAGAGCTTGTCAAAAAGATGGAGGAATATTTTCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAACTGAGCAGATAGATTACTCCTCAAATTGTGGCATGTCTAGGTGA 702 0.4459 MIEKKTQCEKKEKMEGEETEMKQQSRFKRICVFCGSSPGNKSSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYEGGRHVIGVIPKTLMPREITGETVGEVMAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLCFIDKAVEEGFISPKARHIIVSAPSTKELVKKMEEYFPQHERVASKLSWETEQIDYSSNCGMSR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0629 233 Gene3D - 16 204 - -
Gso12g0629 233 PANTHER LOG FAMILY PROTEIN YJL055W 18 233 - -
Gso12g0629 233 MobiDBLite consensus disorder prediction 1 21 - -
Gso12g0629 233 SUPERFAMILY MCP/YpsA-like 26 205 - -
Gso12g0629 233 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 18 233 - -
Gso12g0629 233 TIGRFAM TIGR00730: TIGR00730 family protein 28 205 IPR005269 GO:0009691|GO:0016787
Gso12g0629 233 Pfam Possible lysine decarboxylase 72 202 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0629 Gso-Chr12 5910797 5916374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0629 K22522 - gmx:100815735 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0629 12 5910797 5916374 Gso11g1499 11 17490951 17496947 GST
Gso12g1472 12 37666060 37671169 Gso12g0629 12 5910797 5916374 PCT
Gso11g3370 11 49567479 49572007 Gso12g0629 12 5910797 5916374 PCT
Gso12g0629 12 5910797 5916374 Gso12g1472 12 37666060 37671169 PCT
Gso12g0629 12 5910797 5916374 Gso11g3370 11 49567479 49572007 PCT