Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3370 ATGGAGAAAGAAACAGAGATGAAGCAATCCAAGTTCAAGAGGATTTGTGTCTTCTGTGGCAGTAGTCCAGGGAACAAAACTAGTTATAAGGACGCTGCTATTGAGCTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTAGTATATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTTTACGAGGGTGGTCGCCATGTAACTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTCACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGGAAAGCAGAGATGGCCAAGCGCTCTGATGCCTTTATTGCCTTACCCGGTGGCTATGGGACACTTGAGGAACTCCTTGAGGTGATAACATGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATACCTTTTTGTCTTTCATTGACAAAGCGGTGGAGGAAGGCTTCATAAGCCCCACTGCTCGTCATATAATTGTATCTGCCCCAACACCAAAAGAGCTTGTCAAAGAGATGGAGGAATATTTCCCACAACACGAAAGAGTTGTCTCCAAGCTAAGCTGGGAAAGTGAACAGCTACATTAG 630 0.4556 MEKETEMKQSKFKRICVFCGSSPGNKTSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYEGGRHVTGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKRSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLSFIDKAVEEGFISPTARHIIVSAPTPKELVKEMEEYFPQHERVVSKLSWESEQLH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3370 209 Gene3D - 2 189 - -
Gso11g3370 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Gso11g3370 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Gso11g3370 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
Gso11g3370 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Gso11g3370 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3370 Gso-Chr11 49567479 49572007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3370 K22522 - gmx:100811156 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1472 12 37666060 37671169 Gso11g3370 11 49567479 49572007 GST
Gso11g3370 11 49567479 49572007 Gso12g0629 12 5910797 5916374 PCT
Gso11g3370 11 49567479 49572007 Gso11g1499 11 17490951 17496947 PCT
Gso12g0629 12 5910797 5916374 Gso11g3370 11 49567479 49572007 PCT
Gso11g1499 11 17490951 17496947 Gso11g3370 11 49567479 49572007 PCT