Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0776 ATGTCATCAGCACCTATGACCGACAACAACAAGGTTCAAAACAAAGGCCTTTTATCTTCTTCTTCTTCTTCTTCTTCTGTGAGGATAGAGGAAGAGATCATGAAGCAGGGCATCATAACCATTTTGAACTCAAACACAAACACAAACACACCTTCTTCTTCTTCTTCTTCTTCTCTGCGAAGAACTCTCTCCGCAGACATGTCCTCAAAGAACTACTTGCATGCAAAAACCATTGCTGACTCAGAAAAAGAAGAAGAAGATAATGAAGATGAAGCTGAGAGAGAGAGGCTGGAGATTTGGAGCTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGAGCCTTTGATATGTGGAGCTCAATCGTATCTCTCAAGGGCAAAGATGAAATCTCCAAATCAATGCCTATTACACCTTATGTTCACCCTCTTGTCAAAAGGTCCAAGAGTTGTTTGAGTGGCAAGAGCCTCGAAATCTGCACTGAGAGTCTCGGCTCCGAGACTGGCTCTGATGCCCTGTTGTTATCTTCTCACTCTTCTTCTTCTGAGACAGGGGATGCAACAGAGCAAGAACAAGACAAAGAACAAGTTAACGAAGAAGAAGAAGAAGAGTTATGCAATTATGCTTCAGTGGTGGCTACAAAGAAGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCACCACCACGCGCTTTCCCTCCACCACTTCCTTCACTCTCTCATCACCAAGCAAGTTCTTCAGTAACTCACATGCGTTCCCACCGCGACAATGGAAGGTTGGTTCTCCAAGCTGTTTCTGTTCCTTCTCACAACAATTTCAGCATTCAGCGCCAAGATGGTCGCCTTGTCCTCACTTTCTCCAATCACCAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGAATGGTGATCATGTGGAGGAGTTGGGAGAAGAGTGCTTTGGAGGGTTTGAGTTTGGAGAAGAGGAGGATTATTATGACGAGGGTGAAGATGAAGAGGAAGAGGAATACTTTCTTGGCACGAAGCCACAGGTATCCTCTATTGAACCCAATTCTGTTCTGATGGGGTACGAGAGTGTGATAGAGAAAGCGCCGCTATTGCCTAGTGGGGTGACAAGTAGTGTTCATGAGTTGGCTTTGATGATGAATATTAAGAATAAGCCAATTGGGGTAGTGAATAGGAATCCAAAGTGGTCGGAGAAGTTCAATGAGATGACCAATTTTGATGATGTTAATGTGGCAGCACAATCACTGCCTCCAAGGCCAAGGGTGGCAAGGTTGATTCCATCAGCACCAGCTGCTTCTTTCAATTTCAATGCTTATGAATACTATTGGAGGACCAAGTCTGCATCATCAAAAGGTACTAGTGTTAACCTTAACCAACTTGACCAAGAGAAACTGAAGAGCAAGGTTGTTGTGTCCGGGGACATGAACAAGGTGGTCTCAAGGGAGCAACAGCAGTTGCTGGTTCTTAGAGGGAAGAATGGTGATTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCCTGA 1578 0.4518 MSSAPMTDNNKVQNKGLLSSSSSSSSVRIEEEIMKQGIITILNSNTNTNTPSSSSSSSLRRTLSADMSSKNYLHAKTIADSEKEEEDNEDEAERERLEIWSSIQRNKKEEQEKSGAFDMWSSIVSLKGKDEISKSMPITPYVHPLVKRSKSCLSGKSLEICTESLGSETGSDALLLSSHSSSSETGDATEQEQDKEQVNEEEEEELCNYASVVATKKASASASASASPPRAFPPPLPSLSHHQASSSVTHMRSHRDNGRLVLQAVSVPSHNNFSIQRQDGRLVLTFSNHQEEEEEEEEEEEENGDHVEELGEECFGGFEFGEEEDYYDEGEDEEEEEYFLGTKPQVSSIEPNSVLMGYESVIEKAPLLPSGVTSSVHELALMMNIKNKPIGVVNRNPKWSEKFNEMTNFDDVNVAAQSLPPRPRVARLIPSAPAASFNFNAYEYYWRTKSASSKGTSVNLNQLDQEKLKSKVVVSGDMNKVVSREQQQLLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0776 525 MobiDBLite consensus disorder prediction 173 187 - -
Gso12g0776 525 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 31 524 - -
Gso12g0776 525 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 31 524 IPR021410 -
Gso12g0776 525 MobiDBLite consensus disorder prediction 288 307 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 221 253 - -
Gso12g0776 525 Pfam Fantastic Four meristem regulator 231 286 IPR046431 -
Gso12g0776 525 Coils Coil 188 208 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 43 94 - -
Gso12g0776 525 Coils Coil 78 98 - -
Gso12g0776 525 Coils Coil 289 310 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 173 206 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 43 75 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 290 307 - -
Gso12g0776 525 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0776 Gso-Chr12 8020144 8022451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0776 - - gmx:100787948 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0776 12 8020144 8022451 Gso11g1335 11 14836004 14838479 GST
Gso12g1595 12 39493155 39495079 Gso12g0776 12 8020144 8022451 PCT
Gso11g3259 11 48378734 48380645 Gso12g0776 12 8020144 8022451 PCT
Gso12g0776 12 8020144 8022451 Gso12g1595 12 39493155 39495079 PCT
Gso12g0776 12 8020144 8022451 Gso11g3259 11 48378734 48380645 PCT