Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3259 ATGTCAACTTGTATGAGCAAGAAAATCCAAGGCCAAAGCCTTTCTATAGAAGAAGAGAACATGCTGGTGGTGCAGAAGCAGGGAATCGTGACCATTTTGGGCTCTAACCACGATGCTCCGACAACTTCTCTTCGACGCACTTTATCCGCAGACATGTCTTCCAAGACATGGCTTTCTCAAAACGGCTTCTCTCTCATGAAAAAAACCTCTTCCTCTGAAGAACTCTCTTACTCATCACTCACAAAATCCACTATTTCTGACTCATCCTCGTCTGATGAAGATAACAGCGAAGAAGCGAAACAAGACCAGTTCCAAATTTGGAACACAATTCAAAAGGAGCAGCAGCATGAGGACAACAAACCAGGACAGGTTGATGTGTGGAGTTCAATTTTGGTCCAAAAAGCCAACGAGGAAACCTTAAAACTAAGCACAACTCCTTATGTTCACCCACTTGTGAGAAGGTCAAAGAGTTGTTTGAGTGAAAAAAGTTTAGAGATTTGCACGGAGAGTCTTGGATCCGAAACTGGCTCAGATGGGTTCTCTTCTTACTCACCCTCTGAGACAGAAGAAAAAGAAGAAGAAAAAGAGGAAGAGAGTATGCAAATTACACACGAGGAGGATTTTCAAGTGCCAAAACAAAACTATGCTGAGAAAAAGTCCTTGCCTCGTTCTTTCCCTCCTCCACTTCCTTCACTCCACATGCGTTCACACCGTGACAATGGAAGGTTGTTCCTACAAGCTGTGTCTGTTCCTTCACAGAACAACTTTTGTGCTCAACGAGAAAACGGTCGACTTGTCCTCACTTTTGCTGACGTGGAGGTAGCTGAAGAAGAAGAAGAAGAGTTTGATGAGGCAGAGGAATTTGAGAGTGTGATAGAGGAAGCAAAAACACCCATGTTAACGTTGTTATCTAGTGGGTTTGGGTTAGCATTAATGATGAATAAGCCAATTGGGTTATTAGGTACTGATGCTAACGTTAAGAGTCCAAAATGGTCAGAGAAGTTCAACGATGTGGTCAATTTTAAGGATGTTGATACGGTACAACATAGTCATCCACTGCCACCGAGGCCAAGGCAGCATGGTAGTATTCATAAAAAGGCTTTCAATGCTTATGAATACTATTGGAGGACCAAGCCTACGACAAAAGTTGCTCCTGCTTCTAACACGTTTACCTTTCAACACAACAACAATTACTCTTCCTTGGAGAACAATTTGAAGAGTTGCAAGGATTCTAGGAGGTCTTTTCTGATCTGGGAACCGTATTGCATTGCCACCTGA 1278 0.428 MSTCMSKKIQGQSLSIEEENMLVVQKQGIVTILGSNHDAPTTSLRRTLSADMSSKTWLSQNGFSLMKKTSSSEELSYSSLTKSTISDSSSSDEDNSEEAKQDQFQIWNTIQKEQQHEDNKPGQVDVWSSILVQKANEETLKLSTTPYVHPLVRRSKSCLSEKSLEICTESLGSETGSDGFSSYSPSETEEKEEEKEEESMQITHEEDFQVPKQNYAEKKSLPRSFPPPLPSLHMRSHRDNGRLFLQAVSVPSQNNFCAQRENGRLVLTFADVEVAEEEEEEFDEAEEFESVIEEAKTPMLTLLSSGFGLALMMNKPIGLLGTDANVKSPKWSEKFNDVVNFKDVDTVQHSHPLPPRPRQHGSIHKKAFNAYEYYWRTKPTTKVAPASNTFTFQHNNNYSSLENNLKSCKDSRRSFLIWEPYCIAT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3259 425 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 20 425 - -
Gso11g3259 425 Pfam Fantastic Four meristem regulator 224 269 IPR046431 -
Gso11g3259 425 MobiDBLite consensus disorder prediction 170 184 - -
Gso11g3259 425 MobiDBLite consensus disorder prediction 76 101 - -
Gso11g3259 425 MobiDBLite consensus disorder prediction 76 90 - -
Gso11g3259 425 MobiDBLite consensus disorder prediction 170 209 - -
Gso11g3259 425 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 20 425 IPR021410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3259 Gso-Chr11 48378734 48380645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3259 - - gmx:100790085 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1595 12 39493155 39495079 Gso11g3259 11 48378734 48380645 GST
Gso11g3259 11 48378734 48380645 Gso12g0776 12 8020144 8022451 PCT
Gso11g3259 11 48378734 48380645 Gso11g1335 11 14836004 14838479 PCT
Gso12g0776 12 8020144 8022451 Gso11g3259 11 48378734 48380645 PCT
Gso11g1335 11 14836004 14838479 Gso11g3259 11 48378734 48380645 PCT