Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1335 ATGTCATCAGCACCTATGACCAACAACAACAACAACAAGGTTCAAAGCCAAGGCCTATCATCTTTTTCTTCTTCTTCTTCTTCCTATGTGAGAATAGAGGAAGAGATCATGAAGCAAGGCATCATCACCATATTGAACACAAACACACCTTCTTCTCTGAGAAGAACTCTCTCCGCAGACATGTCCTCAAAGAACTACTGGCTCTCTCAGAACATTGCTCCCTCAGAAGAACAAGACTTGCATGCAAAAACCATTGCTCCCTCAGAAGAAGATGAAGAGGCCAACAACAACAACAAGGAGCTTGAAGAAGAAGATGAAGCTGAAAGAGAGAGGCTTGAGATTTGGAGCTCCATCCAGCGGAACAAGAAGGAGGAGCAAGAGAAATCAGGAGCCTTTGACACGTGGAGTTCAATCATGTCCCTCAAGGGCAAAGATGAAATCTCCAAATCAATGCCTATTACACCTTATGTTCACCCTCTTGTCAAAAGGTCAAAGAGTTGTTTGAGTGAGAAGAGTCTCGAAATCTGCACTGAGAGTCTCGGTTCTGAGACTGGCTCTGATGCCTTGTTGTTCTCTTCTTACTCTTCCTCTTCTGAGACAGGGGATGCTGATGCAGAGCAACAACAACAACAAGAGAAAGAACAAGTAAAAGAAGAAGAAGAAGAAGGAGAAGAAGAGTTATGCAATTATGCTTCAGTGGTGGCTACAAAGAAGGCTTCGGCTTCGGCTTCACCACCACGCGCTTTCCCTCCACCACTTCCTTCACTCTCTCATCACCAAGCAAGTTCTTCAGTAACTCACATGCGTTCCCACCGTGACAATGGAAGGTTGGTTCTCGAAGCTGTTTCTGTTCCTTCTCACAACAATTTCAGCATTCAGCGCCAAGATGGTCGCCTTGTCCTCACTTTCTCCAATCACCAAGAAGAAGAAGAAGAAGATAATGATGATCATGTGGAGGAGTTGGAAGAAGAGTGCTTTGGAGGGTTTGAGTTTGGAGAAGATGAGGAGGATTATTATGACGAGGAAGACGAGTTTGAAGACGACGACGCAGAGGAAGAGGAATACTTTTTCGGTGCGAAGCACCCACAAGTATCCTCTACTGAAGGCAATTCTGTTCTGATGAGTTACGAGAGTGTGTCAGAGAAAGTGCCGCTATTACCTACTGGGGTGACAAGTAGTGTTCATGAGTTGGCTTTGATGATGAATAATAATGATAATAATAAGAATAAGTCAATTGGGATAGTGAACAGGAATCCAAAGTGGTCGGATAAGTTCAATGAGATGACCAACTTCGATGATGTTAATGTGGCAGCACAATCATCACTGCCTCCAAGGCCAAGGGTGGCAAGGTTGATTCCATCAGCACCTGCTGCAGCTTCTTTCAATTTCAATGCTTATGAGTACTATTGGAGGACCAAGTCTGCATCACCAAAAGGTACAAGTAGTGTTAACCTTAACCAACTTGACCAAGAGAAACTGAAGAGCAAGGTTGTTGTGTCTGGGGGCATGAATAACAACAAGGTGGTCTCAAGGGAGCAACAGCAGTTGCTAGTTCTGAGAGGGAAGAATGGTGATTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCCTGA 1659 0.4436 MSSAPMTNNNNNKVQSQGLSSFSSSSSSYVRIEEEIMKQGIITILNTNTPSSLRRTLSADMSSKNYWLSQNIAPSEEQDLHAKTIAPSEEDEEANNNNKELEEEDEAERERLEIWSSIQRNKKEEQEKSGAFDTWSSIMSLKGKDEISKSMPITPYVHPLVKRSKSCLSEKSLEICTESLGSETGSDALLFSSYSSSSETGDADAEQQQQQEKEQVKEEEEEGEEELCNYASVVATKKASASASPPRAFPPPLPSLSHHQASSSVTHMRSHRDNGRLVLEAVSVPSHNNFSIQRQDGRLVLTFSNHQEEEEEDNDDHVEELEEECFGGFEFGEDEEDYYDEEDEFEDDDAEEEEYFFGAKHPQVSSTEGNSVLMSYESVSEKVPLLPTGVTSSVHELALMMNNNDNNKNKSIGIVNRNPKWSDKFNEMTNFDDVNVAAQSSLPPRPRVARLIPSAPAAASFNFNAYEYYWRTKSASPKGTSSVNLNQLDQEKLKSKVVVSGGMNNNKVVSREQQQLLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1335 552 MobiDBLite consensus disorder prediction 1 24 - -
Gso11g1335 552 MobiDBLite consensus disorder prediction 192 226 - -
Gso11g1335 552 Coils Coil 202 226 - -
Gso11g1335 552 Coils Coil 90 111 - -
Gso11g1335 552 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 34 551 IPR021410 -
Gso11g1335 552 MobiDBLite consensus disorder prediction 239 259 - -
Gso11g1335 552 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 34 551 - -
Gso11g1335 552 MobiDBLite consensus disorder prediction 87 109 - -
Gso11g1335 552 Pfam Fantastic Four meristem regulator 248 303 IPR046431 -
Gso11g1335 552 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1335 Gso-Chr11 14836004 14838479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1335 - - gmx:100787948 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1335 11 14836004 14838479 Gso11g1335 11 14836004 14838479 ECH
Gso12g0776 12 8020144 8022451 Gso11g1335 11 14836004 14838479 GST
Gso12g1595 12 39493155 39495079 Gso11g1335 11 14836004 14838479 PCT
Gso11g3259 11 48378734 48380645 Gso11g1335 11 14836004 14838479 PCT
Gso11g1335 11 14836004 14838479 Gso12g1595 12 39493155 39495079 PCT
Gso11g1335 11 14836004 14838479 Gso11g3259 11 48378734 48380645 PCT