Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0759 ATGGGCGTGTTCAGCGAAGATCCGAATCCCAACCCGAACCCGATCGTGATCCGAGAGGTTTGGGCCTCCAATCTCGAATCCGAATTCGAACTCATCCGCGAACTCATCGATCGCTACCCTTTTATCTCAATGGACACAGAATTTCCCGGTGTTATTTTCCGACCACATGTGGACCCCACCAAACCCTTCAACCACCGCAACCGTCCCTCCGACCACTACCGCCTCCTCAAGTCCAACGTTGACGCTCTCAACCTCATCCAGGTCGGCCTCACCCTCACCGACGCCGCCGGCAACCTCCCCGACCTCGCCGGAAACCGCTCCATCTGGGAATTCAACTTCCGTGACTTCGACGTGGCGCGTGACGCCTACGCTCCCGACTCCATCGATCTTCTCCGTCGTCAGGGCATCGATTTCGCGCGTAACACCGCCGACGGCGTGGATTCCACGTGCTTCGCGGAGCTGATGATGTCTTCGGGGCTCGTGTGCAACGACGCCGTGAGTTGGGTCACGTTCCATAGCGCGTACGATTTCGGTTACTTGGTGAAGATCTTGACGCGCCGTAACCTACCGACGAGGTTGGAGGAATTCTTGAAAACCGTGAAGGTGTTCTTCGGAGATAACGTTTACGACGTGAAGCACATGATGAGGTTCTGTGACACGCTCTACGGCGGATTGGACCGCGTTGCACGGACGCTTAACGTGGACCGCGCCGTAGGGAAGTGCCACCAGGCCGGGTCAGACAGCTTGCTGACGTGGCACGCCTTCCAGAAGATTGTTGACATTTATTTTGTAAAGGAAGAGCACCGAAAACATGCCGGTGTATTGTTTGGACTATAG 837 0.5615 MGVFSEDPNPNPNPIVIREVWASNLESEFELIRELIDRYPFISMDTEFPGVIFRPHVDPTKPFNHRNRPSDHYRLLKSNVDALNLIQVGLTLTDAAGNLPDLAGNRSIWEFNFRDFDVARDAYAPDSIDLLRRQGIDFARNTADGVDSTCFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRRNLPTRLEEFLKTVKVFFGDNVYDVKHMMRFCDTLYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQKIVDIYFVKEEHRKHAGVLFGL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0759 278 Pfam CAF1 family ribonuclease 20 146 IPR006941 -
Gso12g0759 278 SUPERFAMILY Ribonuclease H-like 16 277 IPR012337 -
Gso12g0759 278 PANTHER RIBONUCLEASE CAF1, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED 14 278 - -
Gso12g0759 278 Gene3D - 5 278 IPR036397 GO:0003676
Gso12g0759 278 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 14 278 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0759 Gso-Chr12 7648083 7649098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0759 K12581 - gmx:100811298 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0759 12 7648083 7649098 Gso11g1353 11 15267882 15268873 GST
Gso12g1578 12 39270995 39272154 Gso12g0759 12 7648083 7649098 PCT
Gso11g3272 11 48549867 48551028 Gso12g0759 12 7648083 7649098 PCT
Gso12g0759 12 7648083 7649098 Gso12g1578 12 39270995 39272154 PCT
Gso12g0759 12 7648083 7649098 Gso11g3272 11 48549867 48551028 PCT