Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0711 ATGGAGTTGGGAAGCATACTCCATTTTCTTCAGGACAAGAACATTTTGATCACTGGAGCCACTGGCTTTCTTGCCAAAGTTTTGTTGGAGAAGATATTGAGGGTCCAACCAAATGTTAAGAAGCTTTACCTTCTTCTAAGAGCTGCAGATGCCAAATCTGCCACTCATCGCTTGAACAATGAGATCATAGGGAAGGATTTGTTTAGGGTACTAAAGGAGAAATTGGGTGCAAATTTTAATTCCTTTGTCTCGAAAAAGTTGACTCTGGTACCCGGGGACATCTCTCGTGAAGACTTGGGATTGGAGGATTCCATTCTAAGGGAAGAGATTTATGATCAAACAGATGTCATTATTAACTTAGCTGCAACAACTAACTTTGATGAAAGGTATGATATATCGTTGGGTCTAAATACCTTTGGTGTTAAGTATGTCATCAACTTCGCCAAAAAATGTACCAAACTCGAGGTTCTTGTGCATGTATCAACAGCCTATGTATGTGGTGAGGGAGGCCGAGAAGGGCTCATATTAGAGAAACCATATCATTTGGGTGATTCACTGAATGGAGTGTCTGGATTAGACATTAATGCAGAAGAGAAAGTTGTGCGTGACAAATTAAGTGAGTTACAACAACTGGGGGCCACAGAAAAGGAAATTAAAGAGGTTATGAAGGACTTGGGCATTAGCAGGGCAAAGTTATATGGATGGCCAAACACATATGTATTCACCAAGGCAATGGGAGAGATGCTTGTGGAGCAACTAAAAGGAAACTTATCCGTTGTGACCATTCGTCCCACCATTGTTACCAGCACATTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTAGCTTATGGGAAAGGAAAATTAACATGCTTCCTTGGAGATCTCAAAGCAATTGTTGATGCGATACCAGCTGACATGGTGGTGAATGCAATACTTGTGGCCATGGTGGCTCATGCAAATCATCCTAGTGATGATGTTATATATCATGTTGGTTCCTCTGTTAGAAGACCACTAAGATATGGCAATCTTCAAGAGTATGGCTTTAGATATTTCACAGCAAAACCATGCATAAACAAGGATGGAAGGCCAGTTAAGGTTGGAAAAGTTACAGTGTTGAGCAACATGGATAGCTTCAGAAGATATATGTTCATTCGCTACCTGCTTGTGTTAAAGGGACTTGAGCTGGCCAATACTGCATTTTGCCAGTATTTCCAAGGAACATATCTTAATCTCAATAGGAAGATTCAGATTGTGATGCGGTTGGTGGACCTTTACAAGCCTTACTTGTTCTTTAAAGCTGCATTTGATGATATGAACACAGAGAAGTTGAGAATGGCAGCAAGACAAGGTGGGGTGGAGACAGATTTGTTTTATTTTGACCCCGAACTGATTGATTGGGAAGATTACTTTTTGAACATCCATCTTCCTGGTGTGGTGAAGTACATTTTGAAGTGA 1482 0.4089 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNNEIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINLAATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPYHLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYFTAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNLNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYFLNIHLPGVVKYILK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0711 493 Pfam Male sterility protein 17 320 IPR013120 -
Gso12g0711 493 Gene3D - 8 373 - -
Gso12g0711 493 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 492 IPR026055 GO:0080019
Gso12g0711 493 PANTHER FATTY ACYL-COA REDUCTASE 2 492 - -
Gso12g0711 493 CDD FAR-N_SDR_e 13 364 - -
Gso12g0711 493 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Gso12g0711 493 CDD FAR_C 417 492 IPR033640 -
Gso12g0711 493 Pfam Male sterility protein 395 493 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0711 Gso-Chr12 7155756 7162730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0711 113 492 Acyl Lipid Metabolism Gene Families AT4G33790 60.263 6.25e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0711 K13356 - gmx:100798338 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0711 12 7155756 7162730 Gso11g1403 11 16098423 16102639 GST
Gso11g3302 11 48840511 48845044 Gso12g0711 12 7155756 7162730 PCT
Gso12g0711 12 7155756 7162730 Gso11g3302 11 48840511 48845044 PCT