Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3302 ATGGAATTGGGAAGCATAATTCACTTCCTTCAAGATAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAAATATTGAGGGTTCAACCAAATGTGAAGAAACTTTACCTTCTTTTGAGAGCCAGAGATACTGAATCTGCTACTCAACGTTTACATGCTGAGATCATAGGGAAGGACTTATTTAGATTGCTGAAGGAAAAACTTGGTACAAGATTCAATTCCTATGTGTCAGAAAAGTTGACAGTAGTACCTGGAGACATTTCTCAAGAGGACTTGAATTTGAAGGACCCAATTCTAGGGGAAGAGATTTTCAACGAAACAGATGTTATAGTTAATTTAGCTGCAACAACTAATTTTGATGAAAGATATGATGTTGCATTGGGTATAAATACATTAGGAGTTATGCATGTGTTGAGCTTCGCCAAAAAATGCGTCAAACTAAAAGTGCTAATCCACGTATCAACAGCTTATGTATGTGGAGAAAAAGAAGGACTCATACTAGAGGATCCACATCACTTTGGCGTGTCACTAAATGGAGTGCCCGGACTAGACATTGATATGGAAAAAAAAAATGTGGAGCAGAAATTGATTCAGCTTAGAGAGGAAGGAGCCACAGAACATGATATTGAATTGGCCATGAAGGACTTGGGTAGTGAAAGAGCAAAGATGTATGGATGGCCAAACACGTATGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTACAAAGGGAAACATGAACGTTGTAATTGTACGTCCCACAATGGTTACTAGCACTTACACAGAACCTTTCCCTGGTTGGATTGAAGGTTTAAGAACCATAGACAGCATAGTTGTTGCGTACGGTAAAGGAAAACTAGCATGCTTCCTAGCGAATCTTAAGGCAGTTTTTGACGTGATACCGGCTGACATGGTGGTGAATACAATGCTAGTGGCCATGGTGGCTCATGCAAATCAACCTAGTGATATCATCTATCATTTGGGTTCCTCTGTTGTAAATCCGGTTAAGTACCTTAATCTTCGAGACTATAGCGTAAGATATTTCATGGAAAATCCTTGGATAAACAAGGATGGAAAGCCCGTCAAGGTTGGCAAAGTTACCATATTGAGCAACATGGATAGCTTCCGCAAATACATATACATTCGTTACCTGCTTCCCTTAAAGGGGCTAGAGCTGGTCAATGCAGTTTCATGCCAGTATTTTCAGAAAATGTATCTTGACTTCAATCGGAAGATCCGTACTGTCATGCGATTGGTTGAACTTTACAAGCCTTACTTGTTCTTCAATGGGGTGTTTGATAATATGAACACAGAAAAGTTATTATCATCGGCAAGACAAGGTGGGGTAGAGACGGAATTTTTTTACTTTGACCCAAAAATGATTGATTGGGAGGACTATTTCATCAATATCCATTTTCCTGGTATCATCAAGCATGCCTTAAAGTGA 1473 0.3944 MELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHAEIIGKDLFRLLKEKLGTRFNSYVSEKLTVVPGDISQEDLNLKDPILGEEIFNETDVIVNLAATTNFDERYDVALGINTLGVMHVLSFAKKCVKLKVLIHVSTAYVCGEKEGLILEDPHHFGVSLNGVPGLDIDMEKKNVEQKLIQLREEGATEHDIELAMKDLGSERAKMYGWPNTYVFTKAMGEMLVGTTKGNMNVVIVRPTMVTSTYTEPFPGWIEGLRTIDSIVVAYGKGKLACFLANLKAVFDVIPADMVVNTMLVAMVAHANQPSDIIYHLGSSVVNPVKYLNLRDYSVRYFMENPWINKDGKPVKVGKVTILSNMDSFRKYIYIRYLLPLKGLELVNAVSCQYFQKMYLDFNRKIRTVMRLVELYKPYLFFNGVFDNMNTEKLLSSARQGGVETEFFYFDPKMIDWEDYFINIHFPGIIKHALK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3302 490 Pfam Male sterility protein 391 490 IPR033640 -
Gso11g3302 490 CDD FAR-N_SDR_e 13 361 - -
Gso11g3302 490 CDD FAR_C 390 489 IPR033640 -
Gso11g3302 490 Gene3D - 8 383 - -
Gso11g3302 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 488 IPR026055 GO:0080019
Gso11g3302 490 PANTHER FATTY ACYL-COA REDUCTASE 2 488 - -
Gso11g3302 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
Gso11g3302 490 Pfam Male sterility protein 17 318 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3302 Gso-Chr11 48840511 48845044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3302 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 60.526 8.61e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3302 K13356 - gmx:100789566 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3302 11 48840511 48845044 Gso12g0711 12 7155756 7162730 PCT
Gso11g3302 11 48840511 48845044 Gso11g1403 11 16098423 16102639 PCT
Gso12g0711 12 7155756 7162730 Gso11g3302 11 48840511 48845044 PCT
Gso11g1403 11 16098423 16102639 Gso11g3302 11 48840511 48845044 PCT