Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1403 ATGGAATTGGGAAGCATAACCGACTTCCTTCAGAACAAGAACATTTTGGTCATTGGTGCCACTGGCTTCCTTGCCAAAATTTTTGTGGAGAAGGTACTGAGAGTGCAACCAAATGTGAAGAAACTTTATCTACTTTTGAGAGCAACAGATGCCGAATCTGCCTCTCAACGATTGCACAATGAGATTATGCGGAAGGATTTGTTTAGATTGTTGAAAGAAAATGTTGGTGCAAAGTTCAATGCCTTTGTTTCAGAAAAGTTGACTCTTGTGCCTGGGGACATTTCTCAAGAGGACTTGAATTTGAAAGATCCCATTCTACGCGAAGAAATTTACAATCAAATTCATTGTATAGTCAATTTTGCTGCCACAACTAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTCGGAGTTAAGCATGTTTTGAACTTTGCCAAAAGTTGTATTAAGCTAAAGGTGCTTGTCCACGTATCAACAGCATATGTATGTGGTGAGAGAGGAGGACTCATAGTAGAGGATCCATGCCAATTGGGTGTGTCGCTAAATGGAGTGCCTGGACTAGACATTGGCATGGAAAAGAGAGTGGTGGAGGATAAGATGAACCAACTTCATGAAGAGGGAGCCACGGAGGAGGATGTTAAAATGGCCATGAAAGACTTGGGTATGAAAAGAGCAACTTTATATGGATGGCCAAACACATATGTCTTCACAAAAGCAATGGGAGAAATGCTTGTAGAAACTCTAAAGAAAAATATGTCTGTTATTATTGTACGTCCCACAATGATTACCAGTACTTACAAAGAACCTTTCCCTGGATGGGTTGAAGGAGTAAGAACCATAGATAGTGTAATTGTTGCTTATGGCAAAGGAAAACTACCATGCTTCCTTCTAGACATCAACGCAATTTTTGACGTGATACCAGCAGATATGGTAGTGAATGCAATAATAACTACCTTGGTGGCTCATGCAAATCAACCTTGTGATAATATTATATATCAAGTAGGTTCCTCTATTGCAAATCCAATAAGATACCACAATCTCAAAGACTACATCTATAGATATTTCAAGGCAAAACCATGGGTGAACAAAGAGGGAAATCCTGTAATGGTCGGCAAAGTTACTGTATTGGACACCATGACTAGCTTCCAGAGATACATGTTCATTCGTTACTTGCTTCCATTGAAGGGACTAGAGCTAGCCAATGTAGCCTTTTGTCAATATTTTCAAGGAATGTGTCTTGACATTAGAAGGAAGATCCATATAGTGATGCAATTGGTCGACCTTTACAAGCCCTACGTGTTCTTCAAAGGCGTATTTGATAATATGAACACAGAAAAGTTGCAAACAGCGGTCAGACAAGGTGAGGTAGAGATGGAATATTCGGTTTACTTTGACCCTAAAATGATTGATTGGGAAGACTACTTCATGAATATCCATATTCCTGGTATAGTCAAGTATGTCTTCAAGTAA 1479 0.3908 MELGSITDFLQNKNILVIGATGFLAKIFVEKVLRVQPNVKKLYLLLRATDAESASQRLHNEIMRKDLFRLLKENVGAKFNAFVSEKLTLVPGDISQEDLNLKDPILREEIYNQIHCIVNFAATTNFDERYDVALGINTFGVKHVLNFAKSCIKLKVLVHVSTAYVCGERGGLIVEDPCQLGVSLNGVPGLDIGMEKRVVEDKMNQLHEEGATEEDVKMAMKDLGMKRATLYGWPNTYVFTKAMGEMLVETLKKNMSVIIVRPTMITSTYKEPFPGWVEGVRTIDSVIVAYGKGKLPCFLLDINAIFDVIPADMVVNAIITTLVAHANQPCDNIIYQVGSSIANPIRYHNLKDYIYRYFKAKPWVNKEGNPVMVGKVTVLDTMTSFQRYMFIRYLLPLKGLELANVAFCQYFQGMCLDIRRKIHIVMQLVDLYKPYVFFKGVFDNMNTEKLQTAVRQGEVEMEYSVYFDPKMIDWEDYFMNIHIPGIVKYVFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1403 492 CDD FAR-N_SDR_e 13 362 - -
Gso11g1403 492 Pfam Male sterility protein 392 492 IPR033640 -
Gso11g1403 492 Gene3D - 7 381 - -
Gso11g1403 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 491 IPR026055 GO:0080019
Gso11g1403 492 CDD FAR_C 391 491 IPR033640 -
Gso11g1403 492 PANTHER FATTY ACYL-COA REDUCTASE 2 491 - -
Gso11g1403 492 Pfam Male sterility protein 19 318 IPR013120 -
Gso11g1403 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 335 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1403 Gso-Chr11 16098423 16102639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1403 112 491 Acyl Lipid Metabolism Gene Families AT4G33790 57.632 1.66e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1403 K13356 - gmx:100793197 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1403 11 16098423 16102639 Gso11g1403 11 16098423 16102639 ECH
Gso12g0711 12 7155756 7162730 Gso11g1403 11 16098423 16102639 GST
Gso11g3302 11 48840511 48845044 Gso11g1403 11 16098423 16102639 PCT
Gso11g1403 11 16098423 16102639 Gso11g3302 11 48840511 48845044 PCT