Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0696 ATGTCCAATTCCAATCCTAACAACCGTAACCGACACGCTCCGTCGCCGCCGGAGCCCAAGCCCATGCCGCCTTCTTCTTGGGCCAAGAAAACCGGCTTCAGGCCCAAACTCTCCGGCGAGACCAATGTCACCGATTCCGGCCCGATAACCACCCCGCCTCCCAACGTAGATCTCGAGGCCGGTCGTGTTCGGACTCCGGCCACCGCTAACGGCGTCACCAACGGCGACAAGGCTCCCGTTCCGGTTCCTCCGCCTCCTGCGGCGGCAAAGAAGCGGAGAGACTCCGACGGCGTGCCGAAGAGTTCTGTTCTCAGCACCAACGGACAGGCGCCGGCGGCGGAGCCGCCGCCGCGGAGGACGGCGAGGCACGAGGAAGTGGTAGACGGTTTGCCGGCGGATGACGACGAGTTTGTGTCGCGGCACTCGCATATGAAGTATGAACTCAGAGATTCACCTGGTTTAGTTCCTATTGGCGTGTACGGAATTCAGCACTACTTTTCCATATTAGGTTCGTTGGTTCTGATTCCGCTTGTGATTGTTCCTACAATGGGAGGCACTCATGAGGAAACTTCTATGGTGGTATCGACCGTGCTCTTTGTCTCGGGGGTGACAACTCTCTTGCATATTGCTTTTGGCTCCAGGTTGCCCTTGATTCAGGGCCCTTCTTTTGTTTATCTCGCACCGGCCCTCGCGATAATCAACTCCCCGGAGTTTCAAGGATTGAATGAAAATAAATTCAAGCATATAATGAGGGAGCTCCAGGGGGCTATAATTATTGGCGCAGCTTTCCAAACTTTACTTGGGTATACTGGACTTATGTCGCTGTTAGTAAGATTGATCAATCCTGTAGTAATATCCCCAACTATTGCTGCAGTTGGACTTTCATTCTACAGTTATGGTTTCCCATTAGTTGGTACATGTATTGAGATCGGTGCAGTACAAATATTAGTGGTTATTGTTTTTTCTCTTTATCTTCGTAAGATATCTGTTCTTGGACATCGCATATTTCTAATATATGCGGTTCCTCTGGGTCTGGCAATTACATGGGCATTTTCTTTCATGCTGACTGAAGCAGGAGTTTACAGCTACAAAGGGTGTGATGCAAATATACCTGCCTCAAATATGGTTTCAGAGCACTGCAGAAAGCATTTCTCAAGGATGAGGCACTGTCGGGTTGATACTTCTCAAGCATTGAAATCCTCTTCATGGTTTAGGTTTCCTTATCCACTACAATGGGGTACTCCTGTCTTCCACTGGAAAATGGCTATTGTGATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTGGCTCATACCATGCATCTTCATTACTGGTAGCATCCAGACCGCCAACTCCCGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTGCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGATCTACAACTTTAACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCAGGGCAGTTCAACTGGGTGCATGCTTTCTGATAGTGTTGTCTCTTATAGGTAAGGTTGGAGGATTCATTGCTTCAATTCCCGAAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTCACAGCATTAGGCTTGTCAAATCTACGCTATAGTGAGGCTGGAAGCTCTCGAAATATCATCATAGTTGGGTTATCATTGTTTTTCTCTCTTTCCATACCTGCCTACTTTCAACAATATGGCATCTCTCCAAATTCCAACTTGTCTGTGCCAAGTTATTTTCAGCCCTACATTGTGACTTCTCACGGGCCTTTCCACAGCAAATATGGAGGGTTGAACTATGTCTTGAACACACTTTTTTCACTACACATGGTGATAGCGTTTCTTGTCGCTTTTATCCTGGATAATACTGTACCCGGCAGTAAGCAGGAACGTGGGGTATATGTTTGGTCCGAAGCAGAGATTGCTAGAAGAGAGCCTGCTGTTGCTAATGACTATGAATTACCCTTGAAAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTGGGCCTGTAA 2052 0.48 MSNSNPNNRNRHAPSPPEPKPMPPSSWAKKTGFRPKLSGETNVTDSGPITTPPPNVDLEAGRVRTPATANGVTNGDKAPVPVPPPPAAAKKRRDSDGVPKSSVLSTNGQAPAAEPPPRRTARHEEVVDGLPADDDEFVSRHSHMKYELRDSPGLVPIGVYGIQHYFSILGSLVLIPLVIVPTMGGTHEETSMVVSTVLFVSGVTTLLHIAFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNENKFKHIMRELQGAIIIGAAFQTLLGYTGLMSLLVRLINPVVISPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAFSFMLTEAGVYSYKGCDANIPASNMVSEHCRKHFSRMRHCRVDTSQALKSSSWFRFPYPLQWGTPVFHWKMAIVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLASVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACFLIVLSLIGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVTSHGPFHSKYGGLNYVLNTLFSLHMVIAFLVAFILDNTVPGSKQERGVYVWSEAEIARREPAVANDYELPLKVGRIFRWVKWVGL* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0696 683 MobiDBLite consensus disorder prediction 1 134 - -
Gso12g0696 683 MobiDBLite consensus disorder prediction 117 134 - -
Gso12g0696 683 Pfam Permease family 159 576 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso12g0696 683 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 27 683 - -
Gso12g0696 683 MobiDBLite consensus disorder prediction 37 51 - -
Gso12g0696 683 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 27 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0696 Gso-Chr12 6935050 6943053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0696 18 683 Organic Solute Cotransporters AT2G27810 69.916 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0696 - - gmx:100793041 1311.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0696 12 6935050 6943053 Gso11g1422 11 16367989 16376010 GST
Gso12g1529 12 38720781 38727340 Gso12g0696 12 6935050 6943053 PCT
Gso11g3316 11 48938312 48944744 Gso12g0696 12 6935050 6943053 PCT
Gso12g0696 12 6935050 6943053 Gso12g1529 12 38720781 38727340 PCT
Gso12g0696 12 6935050 6943053 Gso11g3316 11 48938312 48944744 PCT