Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1422 ATGTCCAGTTCCGATCCTAACAACCGTAACCGCCACGCTCCGTCTCTGCATGAGCCCAAGCCCATGCCGCCTTCTTCTTGGGCCAAGAAAACGGGCTTCAGGCCCAAATTCTCCGGCGAGACCAATGTCACCGATTCCGGCCCGATATCCACGCCGCCGCCCAACGTGGATCTCGAGGCCGGTCGTGTTCGAACTCCGGCAACCGCTAACGGCGTCGCCAACGGCGACAAGGCTCCCGTCCCGGTTCCGCCGCCACCTGCCGCGGCTAGGAAGCGGAGAGACTCCGACGGCGGGCCGAGGAGTTCTGTTCCCAGCACCAACGGACAAGCGCCGGCGGCGGAGACGGCTCCACCGCCGCGGAGAACGGCGAGGCACGAGGAAGTGGTGGACGGCTTGCCGGCGGATGACGACGGGTTTGTGTCGCGGCACTCGCATATGAAGTATGAACTCAGAGATTCGCCTGGTTTAGTTCCTATTGGCGTGTACGGAATTCAGCACTACTTTTCGATATTAGGTTCGTTGATTCTGATTCCGCTTGTGATTGTTCCTGCCATGGGAGGCACTCACGAGGAAACTTCTATGGTGGTATCGACCGTGCTCTTTGTCTCGGGGGTGACTACTCTCTTGCATATTGCTTTTGGCTCTAGGTTGCCCTTGATTCAGGGCCCTTCTTTTGTTTATCTCGCACCTGCACTCGCAATAATCAACTCCCCAGAGTTTCAAGGATTGAATGGAAATAAATTCAAGCATATAATGAGGGAGCTACAGGGGGCTATAATTATTGGCTCCGCTTTCCAAACTTTACTTGGATATACTGGACTTATGTCGCTGTTAGTAAGGCTGATCAATCCTGTAGTTATATCCCCAACTATTGCTGCAGTTGGACTTTCATTCTACAGTTATGGCTTCCCATTAGTTGGTACATGTATTGAGATCGGTGCAGTACAAATATTAGTGGTTATTGTTTTTTCTCTTTATCTTCGTAAGATATCTGTTCTTGGACATCGCATTTTTCTAATATATGCAGTTCCTCTGGGTCTGGCAATTACATGGGCATTTGCTTTCTTGCTGACTGAAGCAGGAGTTTACAGCTACAAAGGGTGTGATGTAAATATACCTGCCTCAAATATGGTTTCAGAGCACTGCAGAAAGCATTTTTCAAGGATGAGGCACTGTCGGGTTGATACTTCTCAAGCATTGAAATCCTCTACATGGTTTAGGTTTCCTTATCCACTACAATGGGGTACTCCTGTCTTCCATTGGAAAATGGCTATTGTAATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTGGCTCATACCATGCATCTTCATTATTGGTAGCATCCAGACCGCCAACTCCTGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCCAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGATCTACAACTTTAACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCAAGGCAGTTCAACTGGGTGCATGCTTTCTGATAGTGTTATCGCTTGTAGGTAAGGTTGGAGGATTCATTGCTTCAATTCCCAAAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTCACAGCATTAGGATTGTCTAATCTACGCTATAGTGAGGCTGGAAGCTCTCGGAATATCATCATAGTTGGGTTATCATTGTTTTTCTCTCTTTCCATACCTGCCTACTTTCAACAATATGGCATCTCTCCAAATTCCAACTTGTCTGTGCCAAGTTATTTTCAGCCCTACATTGTGACTTCTCACGGGCCTTTCCACAGCAAATATGGAGGGTTGAACTATGTCTTGAACACACTTTTTTCGCTACACATGGTGATAGCGTTTCTTGTCGCTTTTATCCTGGATAATACTGTACCTGGCAGTAAGCAGGAACGTGGGGTATATGTTTGGTCCAAAGCTGAGGTTGCTAGAAGAGAGCCTGCTGTTGCTAATGACTATGAATTGCCCTTGAAAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTGTAA 2058 0.4796 MSSSDPNNRNRHAPSLHEPKPMPPSSWAKKTGFRPKFSGETNVTDSGPISTPPPNVDLEAGRVRTPATANGVANGDKAPVPVPPPPAAARKRRDSDGGPRSSVPSTNGQAPAAETAPPPRRTARHEEVVDGLPADDDGFVSRHSHMKYELRDSPGLVPIGVYGIQHYFSILGSLILIPLVIVPAMGGTHEETSMVVSTVLFVSGVTTLLHIAFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNGNKFKHIMRELQGAIIIGSAFQTLLGYTGLMSLLVRLINPVVISPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAFAFLLTEAGVYSYKGCDVNIPASNMVSEHCRKHFSRMRHCRVDTSQALKSSTWFRFPYPLQWGTPVFHWKMAIVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRKAVQLGACFLIVLSLVGKVGGFIASIPKVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVTSHGPFHSKYGGLNYVLNTLFSLHMVIAFLVAFILDNTVPGSKQERGVYVWSKAEVARREPAVANDYELPLKVGRIFRWVKWVGL* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1422 685 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 27 685 - -
Gso11g1422 685 Pfam Permease family 161 578 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso11g1422 685 MobiDBLite consensus disorder prediction 37 51 - -
Gso11g1422 685 MobiDBLite consensus disorder prediction 1 125 - -
Gso11g1422 685 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 27 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1422 Gso-Chr11 16367989 16376010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1422 18 685 Organic Solute Cotransporters AT2G27810 70.613 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1422 - - gmx:100799537 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1422 11 16367989 16376010 Gso11g1422 11 16367989 16376010 ECH
Gso12g0696 12 6935050 6943053 Gso11g1422 11 16367989 16376010 GST
Gso12g1529 12 38720781 38727340 Gso11g1422 11 16367989 16376010 PCT
Gso11g3316 11 48938312 48944744 Gso11g1422 11 16367989 16376010 PCT
Gso11g1422 11 16367989 16376010 Gso12g1529 12 38720781 38727340 PCT
Gso11g1422 11 16367989 16376010 Gso11g3316 11 48938312 48944744 PCT