Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3316 ATGTCCAATTCCGATCCCAAAACGAGACCCCGTCCGGGACCGTGGCCGCCGGCGCCGGCGCCGGTCGTCAAGGCAATGCCGCCTGCTTCATGGGCCAAGAAAACGGGCTTCAAGCCCAAGTTCTCCGGCGAGGCCAATGCCAGCGACTCGGGCCAGATAAGCCTGCAGCCCAAGCCCAGGGAGCCCGACACAAACGTGGATCTCGAAGCGGGTCGGGCCAGGGATCCGGCGAATGGTGTGGCCCACCAGAACAAGGTTCCGCCGCTTCCACCTTCCAAGGATCAGCTCGTGAAGAAGCGAAGGGACCCCGACGGCCTCCCCAAGAGCTCCGTTCCTAGTACCAATGGCCAAGCCACTGCGGAGCCTCCACCGCCGCCGCCTCCGCGGAGGACGGCGAGGCACGAGGAAGTTGTGGACGCGCCGCCGCAGGACGACGACGATTTCGTGTCGAGGCATTCGCATATGAAGTATGAGCTCAGAGATTCACCTGGTTTAGTTCCCATTGGTGTGTACGGTATTCAACATTACTTATCGATATTGGGTTCGTTGATTCTCATTCCGCTCGTTATAGTTCCGGCAATGGGAGGCTCTCATGAGGATACTTGTTCGGTGATTTCGACTGTGCTCTTTGTATCTGGAGTGACTACACTGTTGCATACAAGTTTTGGGTCGAGGTTGCCCTTGATACAAGGGCCTTCTTTTGTTTATCTGGCTCCGGTGTTGGCCATCATCAACTCCCCCGAATTTCAAGGATTAAATGGAAATAAATTCAAACATATAATGAAGGAGCTGCAAGGGGCTATAATTATTGGATCGGCTTTTCAAACTTTTCTTGGATATTCTGGACTTATGTCACTGTTAGTAAGGTTGATCAATCCTGTGGTTGTATCCCCAACTATTGCTGCAGTAGGACTTTCATTTTACAGTTATGGTTTTCCGCTAGTTGGTACATGTCTGGAGATTGGTGCAGTGCAGATCTTAGTGGTTATTGTTTTTTCTCTTTATCTTCGTAAAATATCTGTTCTTGGACACCGCATATTTCTAATATATGCAGTTCCTTTGGGTCTGGCAATTACATGGGCAGTTGCTTTCTTGCTGACTGAAGCTGGAGCCTACAACTACAAAGGGTGTGACATAAATATACCTGCCTCAAATATGGTTTCTGAGCACTGCAGAAAGCATGTCTCAAGGATGAAGTATTGTCGAGTTGATACTTCTAATGCATTGAAATCATCCCCGTGGTTTAGATTTCCTTATCCATTACAATGGGGTACTCCTGTCTTTCACTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTGATCTCATCTGTGGATTCGGTTGGTTCGTATCATGCATCTTCATTATTGGTAGCATCCAGACCTCCAACTCCCGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACAGGTTCTACTACCTTAACCGAAAATGTTCATACAATTGCTGTCACTAAAATGGGAAGCCGCAGAGCAATTCAATTGGGTGCATGCTTTCTGATTGTGTTGTCTCTCGTGGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCCGAAGTAATGGTTGCTGGTCTCCTATGCTTTATGTGGGCAATGCTTGCAGCATTGGGCTTGTCTAATCTACGTTATAGTGAGGCCGGAAGCTCTCGCAACATCATCATAATTGGGTTATCATTGTTTTTCTCTCTTTCCATACCTGCCTACTTTCAACAATATGGCATCTCTCCAAATTCCAACTTGTCGGTTCCAAGTTATTTCCAACCCTACATTGTAGCTTCTCATGGGCCTTTCCGCAGCAAATATGGAGGGTTAAACTATTTCCTGAACACAATCTTTTCACTACACATGGTGGTAGCTTTTCTTGTTGCTGTTATCTTGGATAATACTGTGCCTGGCAGCAAGCAGGAACGTGGGGTTTACGTTTGGTCAGAACCTGAGGTTGCTAGAAGGGAGCCTGCTGTTGCTAATGACTATGAGTTACCCTTGAGAGTTGGTAAGATTTTCAGATGGGTGAAGTGGGTTGGTCTGTGA 2085 0.4791 MSNSDPKTRPRPGPWPPAPAPVVKAMPPASWAKKTGFKPKFSGEANASDSGQISLQPKPREPDTNVDLEAGRARDPANGVAHQNKVPPLPPSKDQLVKKRRDPDGLPKSSVPSTNGQATAEPPPPPPPRRTARHEEVVDAPPQDDDDFVSRHSHMKYELRDSPGLVPIGVYGIQHYLSILGSLILIPLVIVPAMGGSHEDTCSVISTVLFVSGVTTLLHTSFGSRLPLIQGPSFVYLAPVLAIINSPEFQGLNGNKFKHIMKELQGAIIIGSAFQTFLGYSGLMSLLVRLINPVVVSPTIAAVGLSFYSYGFPLVGTCLEIGAVQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAVAFLLTEAGAYNYKGCDINIPASNMVSEHCRKHVSRMKYCRVDTSNALKSSPWFRFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAIQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVASHGPFRSKYGGLNYFLNTIFSLHMVVAFLVAVILDNTVPGSKQERGVYVWSEPEVARREPAVANDYELPLRVGKIFRWVKWVGL* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3316 694 Pfam Permease family 170 587 IPR006043 GO:0016020|GO:0022857|GO:0055085
Gso11g3316 694 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 29 694 - -
Gso11g3316 694 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 29 694 - -
Gso11g3316 694 MobiDBLite consensus disorder prediction 45 59 - -
Gso11g3316 694 MobiDBLite consensus disorder prediction 1 149 - -
Gso11g3316 694 MobiDBLite consensus disorder prediction 128 149 - -
Gso11g3316 694 MobiDBLite consensus disorder prediction 9 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3316 Gso-Chr11 48938312 48944744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3316 25 694 Organic Solute Cotransporters AT2G27810 71.089 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3316 - - gmx:100780211 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1529 12 38720781 38727340 Gso11g3316 11 48938312 48944744 GST
Gso11g3316 11 48938312 48944744 Gso12g0696 12 6935050 6943053 PCT
Gso11g3316 11 48938312 48944744 Gso11g1422 11 16367989 16376010 PCT
Gso12g0696 12 6935050 6943053 Gso11g3316 11 48938312 48944744 PCT
Gso11g1422 11 16367989 16376010 Gso11g3316 11 48938312 48944744 PCT