Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0684 ATGGCGCGAGTGGATCTGGACGGGAACCCCATGAAGGCACTTACGATCTGCATGATCGGCGCTGGCGGCTTCATAGGCTCGCATCTCTGCGAGAAGCTCATGTCCGAAACCCCTCACACCGTCCTCGCCCTCGACGTCTACAACGACAAGATCAAACACCTCCTCGAACCCTCCGATTCCCCCTGGGCCGGCCGCATCACCTTCCACCGCCTCAACATCAAACACGACTCTCGCCTCGAAGGCCTCATCAAGATGGCAGATCTCACTATTAATCTGGCTGCCATTTGCACTCCCGCGGATTACAACACCCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCCGAGAACAACAAGCGCCTTATCCATTTCTCTACTTGCGAAGTGTACGGAAAGACGATTGGAGCCTTTCTCCCTAAAGATAGTCCTCTTCGTAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAGTCTCCTTGCATTTTTGGTTCTATTGAAAAACAGAGGTGGTCTTATGCCTGTGCGAAACAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTGAGGCCTTTTAACTGGATTGGACCTCGAATGGATTTCATTCCTGGCATTGATGGTCCAAGTGAGGGTGTTCCCCGGGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTTGTTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAACCCTGCCAGGGCCAATGGCCACATATTTAATGTGGGTAACCCAAACAATGAGGTTACTGTTAGGCAGCTTGCTGAAATAATGATTAAGGTTTATTCAAAGGTAAGTGGCGAACAAACTCCTGAAACACCTACCGTTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATCCCTGACATGACCATAATAAACAGGCAGCTTGGATGGAATCCCAAGACTTCACTTTGGGACCTGCTTGAGTCCACTCTGACATATCAGCACAGGACATATGCTGAAGCCGTTAAGAAAGTCATTGCAAAACCCGTTGCAAGTTAA 1158 0.481 MARVDLDGNPMKALTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYNDKIKHLLEPSDSPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIKVYSKVSGEQTPETPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKVIAKPVAS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0684 385 Pfam NAD dependent epimerase/dehydratase family 16 286 IPR001509 -
Gso12g0684 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 368 IPR036291 -
Gso12g0684 385 Gene3D - 14 377 - -
Gso12g0684 385 PANTHER - 1 384 - -
Gso12g0684 385 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 384 - -
Gso12g0684 385 CDD Arna_like_SDR_e 15 370 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0684 Gso-Chr12 6751655 6754421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0684 13 380 Miscellaneous Gene Families AT1G02000 22.137 9.08e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0684 K12449 - gmx:102667779 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0684 12 6751655 6754421 Gso11g1432 11 16561390 16564405 GST
Gso12g1513 12 38514410 38517528 Gso12g0684 12 6751655 6754421 PCT
Gso12g0684 12 6751655 6754421 Gso12g1513 12 38514410 38517528 PCT