Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1432 ATGGCGCGAGTGGATCTGGATGGTAACCCCATCAAGCCACTTACGATCTGCATGATCGGCGCTGGCGGGTTCATCGGGTCGCACCTCTGCGAGAAGCTCATGTCCGAAACCCCTCACACCGTCCTCGCCCTCGACGTCTACAGCGACAAGATCAAACACCTCCTGGATCCCGCCGATTCCCCCCTCCCTTGGGCTGGCCGCATCACCTTCCACCGCCTCAACATCAAACACGACTCTCGCCTCGAAGGCCTCATCAAGATGGCAGATCTCACTATTAATCTGGCTGCGATTTGCACTCCCGCGGATTACAACACTCGCCCTCTCGACACCATTTACAGCAATTTCATCGACGCGCTCCCCGTGGTGAAATACTGTTCCGAGAACAACAAGCGCCTTATCCATTTCTCCACTTGCGAAGTGTACGGGAAAACGATTGGAGCCTTTCTCCCTAAAGATAGTCCTCTTCGCAAGGATCCGGCATACTATGTTCTTAAAGAAGACGAATCTCCTTGCATTTTTGGTTCTATCGAGAAGCAGAGGTGGTCTTATGCATGTGCAAAACAGTTGATTGAGAGGCTGATTTTTGCTGAGGGTGCTGAAAATGGCTTGGAGTTCACAATTGTAAGGCCATTTAACTGGATTGGACCTCGAATGGATTTCATTCCTGGGATTGATGGTCCAAGTGAGGGTGTTCCTCGGGTTCTTGCTTGCTTTAGCAATAATCTTCTCCGAGGAGAGCCCCTCAAGCTTGTGGACGGTGGCCAGTCCCAGAGAACCTTCATTTACATTAAAGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAACCCTGCCAGGGCCAATGGCCACATATTTAATGTGGGCAACCCTAACAATGAGGTCACTGTTAGGCAGCTTGCTGAAATAATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACTGCTGAAACACCTACCATTGATGTGAGCTCAAAAGAATTTTATGGTGAGGGATATGATGACAGTGACAAGAGAATCCCTGACATGACCATAATAAACAAGCAGCTTGGATGGAATCCTAAGACTTCACTTTGGGACCTGCTTGAATCCACTCTGACATATCAGCACAGGACATATGCTGAAGCCGTTAAGAAAGTCATTGCAAAACCCCTCGCAAGTTAA 1164 0.4837 MARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYSDKIKHLLDPADSPLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEIMIQVYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKVIAKPLAS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1432 387 PANTHER - 1 386 - -
Gso11g1432 387 Gene3D - 14 379 - -
Gso11g1432 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 386 - -
Gso11g1432 387 CDD Arna_like_SDR_e 15 372 IPR045869 GO:0016831
Gso11g1432 387 Pfam NAD dependent epimerase/dehydratase family 16 288 IPR001509 -
Gso11g1432 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 370 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1432 Gso-Chr11 16561390 16564405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1432 K12449 - gmx:100811095 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1432 11 16561390 16564405 Gso11g1432 11 16561390 16564405 ECH
Gso12g0684 12 6751655 6754421 Gso11g1432 11 16561390 16564405 GST
Gso12g1513 12 38514410 38517528 Gso11g1432 11 16561390 16564405 PCT
Gso11g1432 11 16561390 16564405 Gso12g1513 12 38514410 38517528 PCT