Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0608 ATGGAGGCTCAGCAGAGAAGAGGAGGATTGGTGCCGCTGTCGCCGGCGCGAGATCTGCGATCTGCGGATTCCAATTCGAGTGGTCACAGCAAGTTCGATAAGGACAAAGGCGTCAATGTGCAAGTCCTTGTTCGTTGCAGGCCGTTGAGTGAAGACGAAGCGAGGTTGAACACACCGATCGTGATTTCCTGTAACGAAGGTAGAAGAGAGGTTTCGGCTGTGCAGAATATTGCCAACAAACAGATCGACAGAACCTTCGCATTTGACAAGGTTTTTGGTCCTAATTCCAAGCAGAAAGAACTTTTTGAACAGGCAATGTCTCCTATTGTGAATGAAGTGCTTGAAGGATATAACTGCACCATCTTTGCGTATGGTCAAACAGGGACAGGGAAGACATACACAATGGAAGGAGGTGCAAGGAAGAAGAATGGAGAGTTTCCTAGTGATGCTGGTGTCATACCAAGAGCCGTGAAACAGATTTTTGACATATTAGAAGCTCAGAATGCCGAGTATAGCATGAAAGTAACGTTTCTAGAGCTTTACAATGAGGAGATAACAGATCTTTTGGCCCCTGAGGAGACTTTAAAATTTGTGGATGACAAATCTAAGAAACCTATAGCTCTTATGGAGGATGGAAAGGGGGGTGTTTTTGTCAGAGGTTTAGAGGAAGAGGTTGTTTGCACTGCAAATGAAATTTATAAGATATTGGAAAAGGGTTCTGCGAAAAGGCGAACGGCTGAGACTCTTCTTAACAAACAAAGCAGTCGTTCCCACTCCATATTTTCTATCACTATTCACATTAAGGAGTGTACTCCAGAGGGTGAAGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTTGCAGGTTCTGAGAATATTTCACGTTCCGGTGCAAGAGAGGGTAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTGCTTACACTTGGTCGAGTGATTAATGCTTTAGTTGATCATTCAGGTCATGTGCCATATAGGGATAGCAAATTAACAAGACTGTTAAGGGATTCCTTGGGCGGTAAAACCAAGACATGCATCGTTGCTACGATATCACCTTCTATTCACTGTCTGGAAGAAACTCTAAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATCAATCAAAAGATGGTGAAATCTGCACTCATTAAGGATCTGTATTCTGAAATTGAAAGACTGAAGCAAGAGGTGTATGCTGCAAGAGAGAAAAATGGAATTTATATACCGCGGGATCGTTATCTTCATGAAGAAGGGGAGAAGAAGGCCATGGTTGAAAAGATAGAACGCATGGAGCTAGAAGCAGAGTCTAAGGATAAGCAATTGATGGAACTTCAAGAACTCTACAAATGTCAGCAACTTTTGACTGTCGAGTTAAGTGATAAACTTGAAAAAAATGAGAAAAGTCTTGAAGAAACTGAGCGGTCATTATTTGATCTTGAGGAGAAACACACACAAGCAAATGCAACTATTATGGAAAAGGAATTTCTAATATCGAATCTACTGAAATCTGAAAAAGCACTTGTGGAGCATGCAATTGAGCTACGAGCTGATCTAGAGAATGCTGCATCTGATGTGTCAAACCTGTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAATAGAATACTTGTCCAGAAATTCCAGTCTCAGTTAGCTCAACAGCTAGAAGATTTGCACAAGACGGTTGCAGCATCTGTAATTCAACAAGAGCAACAACTAAAGGAAATGGAAAGTGATATGCACTCGTTTGTATCAACAAAGGCAGAGGCTATTGAAAATCTAAGAATGCGGGTAGGAAAATTTAAAAACATGTATGGTTCTGGCATTAAAGCTTTGGACAATTTAGCTGAGGAGTTTAAAGGAAATAATCAGTTAACTTTTGAAGCGTTGAATTCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGGATCTTTTCAAAGGAATTGCATTAGAATCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCCAAAAGCAAGAGGCCAAGTTGACTGCTTATGCACGACAACAGGAAGAGGCACATGCCAGAGCAGTGGAGAATACACGTGCAGTATCTAAAATAACTGTGAACTTCTTTGAGACATTACACATGCATGCTTCCAATTTGATCCAAATTGTAGAAGAATCACAATTTACCAATGATCAGAAATTGTATGAACTTGAAAACAAGTTTGAGGAGTGTACTGCCCATGAAGAAAAACAACTACTGGAGAAAGTAGCAGAAATGCTTGCTAGCTCTAGTTCTAGAAAGAAAAAACTGGTTCAAATGGCAGTTAATGATCTTCGGGAGAGTGCAAACGCTAAAATCAGTAGGCTGAGGCAAGAAACCTTAACCATGCAAGATTCCACTTCTTCTGTTAAAGCAGAATGGAAACTTCACATGGAAAAAACGGAGTCCAACTATCATGAGGATACATCTGCAGTAGAATCTGGAAAGAATGACCTTGTGGAGGCTATTCAGCGCTGCCGCAAAAAGGCAGAAGTAGGTGCACAACAATGGAGAAATGCTCAAGAATCCATCCTTAGCCTAGAGAAGAGAAATGCTGCTTCTGTGGATACTATTATTCGGGGAGGAATGGAAGATAATCATCTCCGACGAGACCGATTCTCAAGTGCTGTGTCAACTACACTTGAAGATGCAGAAATCGCAAGCAAGGATATTAACTCATCCATTGAACATTCATTGCAACTTGATCATTACGCTTGTGGGAATCTGAACTCTATGATTATCCCATGCTGTGGTGACTTGAGAGAATTGAAGGGCGGTCATTACCACAGAATTGTAGAGATAAGTGAAAATGCAGGGAAATGTCTTCTCAGTGAATACACGGTAGATGAACCATCTTGTTCAACACCAAGAAAGAGAACCTTCAATTTACCCAGTGTTTCATCCATAGAAGAACTAAGAACCCCATCATTTGAGGAACTACTAAAATCATTCTGGGATGCAAAATCTCCAAAACATGCAAATGGTGATGTTAGATACATTGGGGCATATGAAGCTGCTCAATCCGTAAGAGATTCCAGAGTTCCTCTTGTAGCAATTAACTAG 3120 0.4074 MEAQQRRGGLVPLSPARDLRSADSNSSGHSKFDKDKGVNVQVLVRCRPLSEDEARLNTPIVISCNEGRREVSAVQNIANKQIDRTFAFDKVFGPNSKQKELFEQAMSPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLAPEETLKFVDDKSKKPIALMEDGKGGVFVRGLEEEVVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVDHSGHVPYRDSKLTRLLRDSLGGKTKTCIVATISPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMVKSALIKDLYSEIERLKQEVYAAREKNGIYIPRDRYLHEEGEKKAMVEKIERMELEAESKDKQLMELQELYKCQQLLTVELSDKLEKNEKSLEETERSLFDLEEKHTQANATIMEKEFLISNLLKSEKALVEHAIELRADLENAASDVSNLFSKIERKDKIEEGNRILVQKFQSQLAQQLEDLHKTVAASVIQQEQQLKEMESDMHSFVSTKAEAIENLRMRVGKFKNMYGSGIKALDNLAEEFKGNNQLTFEALNSEVAKHSSALEDLFKGIALESDSLLNDLQSSLQKQEAKLTAYARQQEEAHARAVENTRAVSKITVNFFETLHMHASNLIQIVEESQFTNDQKLYELENKFEECTAHEEKQLLEKVAEMLASSSSRKKKLVQMAVNDLRESANAKISRLRQETLTMQDSTSSVKAEWKLHMEKTESNYHEDTSAVESGKNDLVEAIQRCRKKAEVGAQQWRNAQESILSLEKRNAASVDTIIRGGMEDNHLRRDRFSSAVSTTLEDAEIASKDINSSIEHSLQLDHYACGNLNSMIIPCCGDLRELKGGHYHRIVEISENAGKCLLSEYTVDEPSCSTPRKRTFNLPSVSSIEELRTPSFEELLKSFWDAKSPKHANGDVRYIGAYEAAQSVRDSRVPLVAIN* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0608 1039 Coils Coil 672 699 - -
Gso12g0608 1039 PANTHER KINESIN-LIKE PROTEIN KIN-5D 14 1039 - -
Gso12g0608 1039 Coils Coil 434 461 - -
Gso12g0608 1039 MobiDBLite consensus disorder prediction 1 33 - -
Gso12g0608 1039 ProSiteProfiles Kinesin motor domain profile. 39 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 421 IPR027417 -
Gso12g0608 1039 SMART kinesin_4 37 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 ProSitePatterns Kinesin motor domain signature. 281 292 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso12g0608 1039 PRINTS Kinesin heavy chain signature 116 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 PRINTS Kinesin heavy chain signature 248 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 PRINTS Kinesin heavy chain signature 282 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 PRINTS Kinesin heavy chain signature 331 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 Coils Coil 397 417 - -
Gso12g0608 1039 Coils Coil 469 503 - -
Gso12g0608 1039 Pfam Kinesin motor domain 45 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso12g0608 1039 Gene3D Kinesin motor domain 35 421 IPR036961 -
Gso12g0608 1039 CDD KISc_BimC_Eg5 37 390 - -
Gso12g0608 1039 PANTHER KINESIN-LIKE PROTEIN KIF11 14 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0608 Gso-Chr12 5605934 5612237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0608 39 464 Miscellaneous Gene Families AT5G06670 36.952 1.10e-67 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0608 K10398 - gmx:100805061 1990.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0608 12 5605934 5612237 Gso11g1234 11 11221897 11228124 GST
Gso15g0378 15 3407942 3414416 Gso12g0608 12 5605934 5612237 PCT
Gso11g3424 11 50184075 50190844 Gso12g0608 12 5605934 5612237 PCT
Gso12g0608 12 5605934 5612237 Gso15g0378 15 3407942 3414416 PCT
Gso12g0608 12 5605934 5612237 Gso11g3424 11 50184075 50190844 PCT