Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3424 ATGCAGGCAGCTCAGAGAAGATTGGGAGGAGGAATGGTGCCGTTGTCGCCGTCACAGACTCCGCGCTCCAGCGATAAGCCCGTGCGAGATCTGCGATCTGCGGATTCCAATTCCAACAGTCACAGCAAGTATGATAAGGACAAAGGTGTCAATGTGCAGGTCCTCGTGAGGTGCAGGCCGTTGAGTGAAGATGAAACGAGGCTGCACACGCCGGTTGTGATTTCGTGTAACGAAGGTAGAAGAGAGGTTTTAGCTGTTCAGAATATCGCCAACAAACAGATCGATAGAACCTTCGCATTTGACAAGGTGTTTGGTCCTAACTCTCAACAGAAAGAACTGTATGATCAGGCAGTGTCTCCAATTGTGTATGAAGTGCTTGAGGGCTATAACTGCACTATTTTTGCGTATGGACAGACCGGGACAGGGAAGACATACACAATGGAAGGAGGAGCAAGAAAGAAGAATGGCGAATTTCCGAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAACAGGTTTTTGATATATTGGAAGCTCAGAATGCTGAGTATAACATGAAAGTAACATTTCTAGAGCTTTACAATGAGGAAATAACAGATCTTTTGGCCCCTGAGGAAACTTCGAAATTTATAGATGATAAGTCTAGGAAACCTATTGCTCTAATGGAGGACGGGAAGGGGGGTGTTTTTGTCAGGGGCTTGGAAGAAGAGATTGTTTGCACTGCAAATGAAATTTACAAGATATTAGAAAAAGGTTCTGCAAAGAGGCGTACAGCTGAGACTCTTCTTAACAAACAAAGCAGCCGTTCTCACTCCATATTTTCTATCACAATTCATATTAAGGAATGCACTCCAGAGGGTGAGGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTCGCAGGGTCTGAGAATATTTCACGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAACAAAAGCTTGCTTACACTTGGACGAGTGATTAATGCGCTAGTTGAGCACTCAGGTCATGTTCCATATAGGGATAGCAAATTAACCAGATTGTTGAGGGATTCTTTGGGTGGTAAAACCAAAACGTGCATTATTGCCACAATATCCCCTTCCATTCACTGTCTGGAAGAAACTCTTAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATTAATCAGAAAATGATGAAATCTGCAATGATTAAGGATTTGTATTCTGAAATTGACAGACTAAAGCAAGAGGTGTATGCAGCAAGAGAGAAGAACGGAATCTATGTACCACGTGATCGCTACCTTCACGAAGAAGCAGAGAAGAAGGCCATGACTGAAAAGATAGAACGCATGGAACTAGAAGCAGAGTCTAAGGATAAGCAACTAGTGGAGCTTCAAGAACTCTACAACTCCCAGCAACTTTTGACTGATGAATTGAGTGTTAAACTTGAAAAAACTGAGAAAAGTCTAGAAGAAACTGAGCAGTCATTGTTTGATCTTGAGGAAAGGCACAAACAAGCAAATGCAACAATCAAGGAAAAGGAATTTTTGATATCAAATCTCCTAAAATCTGAGAAAGCACTTGTGGAGCGTGCAATTGAACTGCGAGCAGAGCTCGAGAATGCTGCATCAGATGTGTCAAACCTCTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCAACAACTTGAAGTGTTGCACAAGACAGTTTCAGCTTCAGTAATGCATCAAGAGCAGCAACTGAAGGACATGGAGGACGATATGCAGTCTTTTGTATCAACGAAAGCAGAGGCTACTGAAGATCTTAGACAACGGGTAGGAAAGTTGAAAAACATGTATGGTTCTGGTATCAAAGCTCTGGATGATTTAGCTGAGGAGCTTAAAGTAAATAACCAGTTAACTTATGATGACTTGAAATCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGGATCTTTTTAAAGGAATCGCCTTAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCCACAAGCAAGAAGCCAATTTAACAGCTTATGCTCATCAACAAAGAGAGGCGCATGCCAGAGCAGTGGAGACTACACGGGCAGTATCTAAAATAACAGTGAACTTTTTTGAGACAATCGACAGGCATGCATCGAGTCTGACCGAAATTGTGGAAGAAGCACAATTGGTCAATGATCAGAAATTGTGTGAACTTGAGAAGAAGTTTGAGGAGTGTACTGCCTATGAAGAAAAACAACTACTGGAGAAAGTGGCAGAAATGCTAGCAAGTTCAAATGCTAGAAAGAAACAATTGGTTCAAATAGCAGTCAATGATCTTCGAGAAAGTGCAAATTGTAGAACCAGTAAACTGCGGCAAGAAGCATTAACCATGCAGGAATCTACTTCTTCTGTCAAGGCAGAATGGAGAGTTCACATGAAAAAAACAGAATCCAACTATCATGAGGATACTTCCGCTGTAGAATCTGGGAAGAAAGACCTTGTAGAGGCTCTTCAAATCTGCCTCAACAAGGCAAAAGTAGGTTCACAACAATGGAGAAAAGCTCAAGAATCTTTGCTTAGTTTGGAGAAGAGAAATGCTGCTTCTGTGGATACTATTGTTAGGGGAGGAATGGAAGCTAATCAAGCTCTACGTGCCCGATTCTCAAGTGCTGTATCAACTACACTTGAAGATGCAGGAATAGCAAACAAGGATATTAACTCATCCATTGATCATTCGTTGCAACTTGATCATGAAGCTTGTGGGAATCTGAACTCTATGATCATTCCGTGCTGTGGTGATTTGAGAGAACTGAAGGGTGGTCATTTCCACAGTATTGTGGAGATAACTGAAAATTCAGGGAAATGTCTTCTCAACGAATACATGGTCGACGAACCATCTTGTTCAACACCAAGAAAGAGACTCTTCAATTTACCTTGTGTTTCATCCATAGAAGAACTAAGAACCCCATCATTTGAGGAATTGTTGAAGTCATTCTGGGATGCAAGATCTCCGAAACAAGCAAATGGAGATGTTAAACACATCGGGGCATATGAAGCCGCTCAATCAGTGAGAGATTCCAGAGTCCCTCTCACTGCTATTAATTAA 3156 0.4176 MQAAQRRLGGGMVPLSPSQTPRSSDKPVRDLRSADSNSNSHSKYDKDKGVNVQVLVRCRPLSEDETRLHTPVVISCNEGRREVLAVQNIANKQIDRTFAFDKVFGPNSQQKELYDQAVSPIVYEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQVFDILEAQNAEYNMKVTFLELYNEEITDLLAPEETSKFIDDKSRKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYVPRDRYLHEEAEKKAMTEKIERMELEAESKDKQLVELQELYNSQQLLTDELSVKLEKTEKSLEETEQSLFDLEERHKQANATIKEKEFLISNLLKSEKALVERAIELRAELENAASDVSNLFSKIERKDKIEEGNRILIQKFQSQLAQQLEVLHKTVSASVMHQEQQLKDMEDDMQSFVSTKAEATEDLRQRVGKLKNMYGSGIKALDDLAEELKVNNQLTYDDLKSEVAKHSSALEDLFKGIALEADSLLNDLQSSLHKQEANLTAYAHQQREAHARAVETTRAVSKITVNFFETIDRHASSLTEIVEEAQLVNDQKLCELEKKFEECTAYEEKQLLEKVAEMLASSNARKKQLVQIAVNDLRESANCRTSKLRQEALTMQESTSSVKAEWRVHMKKTESNYHEDTSAVESGKKDLVEALQICLNKAKVGSQQWRKAQESLLSLEKRNAASVDTIVRGGMEANQALRARFSSAVSTTLEDAGIANKDINSSIDHSLQLDHEACGNLNSMIIPCCGDLRELKGGHFHSIVEITENSGKCLLNEYMVDEPSCSTPRKRLFNLPCVSSIEELRTPSFEELLKSFWDARSPKQANGDVKHIGAYEAAQSVRDSRVPLTAIN* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3424 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 433 IPR027417 -
Gso11g3424 1051 PANTHER KINESIN-LIKE PROTEIN KIN-5D 2 1051 - -
Gso11g3424 1051 PRINTS Kinesin heavy chain signature 128 149 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 Coils Coil 527 561 - -
Gso11g3424 1051 Coils Coil 601 621 - -
Gso11g3424 1051 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso11g3424 1051 Gene3D Kinesin motor domain 47 433 IPR036961 -
Gso11g3424 1051 PANTHER KINESIN-LIKE PROTEIN KIF11 2 1051 - -
Gso11g3424 1051 MobiDBLite consensus disorder prediction 1 46 - -
Gso11g3424 1051 Coils Coil 409 429 - -
Gso11g3424 1051 SMART kinesin_4 49 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 Coils Coil 439 473 - -
Gso11g3424 1051 Pfam Kinesin motor domain 57 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 Coils Coil 481 515 - -
Gso11g3424 1051 ProSiteProfiles Kinesin motor domain profile. 51 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g3424 1051 CDD KISc_BimC_Eg5 49 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3424 Gso-Chr11 50184075 50190844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3424 51 423 Miscellaneous Gene Families AT5G06670 38.259 1.03e-65 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3424 K10398 - gmx:100818630 1999.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0378 15 3407942 3414416 Gso11g3424 11 50184075 50190844 GST
Gso11g3424 11 50184075 50190844 Gso12g0608 12 5605934 5612237 PCT
Gso11g3424 11 50184075 50190844 Gso11g1234 11 11221897 11228124 PCT
Gso12g0608 12 5605934 5612237 Gso11g3424 11 50184075 50190844 PCT
Gso11g1234 11 11221897 11228124 Gso11g3424 11 50184075 50190844 PCT