Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1234 ATGGAGGCTCAGCAGAGAAGAGGAGGATTAGTGCCGCTGTCGCCGTCGCAGACGCCGCGCTCCGGCGACAAGCTGGCGCGAGATCTGCGATCTGCGGATTCCAATTCGAGCGGTCACAGCAAATTCGATAAGGACAAAGGCGTCAATGTGCAAGTTCTTGTTCGTTGCAGGCCGTTGAGTGAAGACGAAGCGAGGTTGAACACGCCGATCGTGATTTCGTGTAACGAAGGTAGAAGAGAGGTTTCGGCTGTGCAGAATATAGCCAACAAACAGATCGATCGAACCTTCGCATTCGACAAGGTTTTTGGTCCTAATTCCAAGCAGAAAGAACTTTTTGAGCAGGCAATGTCTCCTATTGTGAATGAAGTGCTTGAAGGATATAACTGCACCATTTTCGCGTATGGTCAAACAGGGACAGGAAAAACTTACACAATGGAAGGAGGTGCAAGGAAGAAGAATGGAGAGTTTCCGAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAACAGATTTTTGATATATTAGAAGCTCAGAATGCCGAGTATAGCATGAAAGTGACGTTTCTAGAGCTTTACAATGAGGAGATAACAGATCTTTTGGCCCCTGAGGAGACTTTAAAATTTGTGGATGACAAATCTAAGAAACCTATAGCTCTTATGGAGGATGGAAAGGGGGGTGTTTTTGTCAGAGGTTTAGAGGAAGAGGTTGTTTGCACTGCAAATGAAATTTATAAGATATTGGAAAAGGGTTCAGCGAAAAGGCGAACGGCTGAGACTCTTCTTAACAAACAAAGCAGTCGTTCCCATTCCATATTTTCTATCACTATTCACATTAAAGAGTGTACTCCAGAGGGTGAAGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTTGCAGGTTCTGAGAATATTTCACGTTCCGGTGCAAGAGAGGGTAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTGCTTACACTTGGTCGAGTGATTAATGCTCTAGTTGATCATTCAGGTCATGTGCCTTATAGGGATAGCAAATTAACAAGACTGTTGAGGGATTCCTTGGGCGGTAAAACCAAGACATGCATAGTTGCTACGATATCACCTTCTATTCACTGTCTGGAAGAAACTCTTAGTACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATCAATCAGAAGATGGTGAAATCTGCACTCATAAAGGATCTGTATTCTGAAATTGACAGACTGAAGCAAGAGGTGTATGCTGCAAGAGAGAAAAATGGAATTTATATACCGCGGGATCGTTATCTTCATGAAGAAGCAGAGAAAAAGGCCATGGTTGAAAAGATAGAACGCATGGAACTAGAAGCAGAGTCTAAGGATAAGCAATTGATGGAACTTCAAGAACTCTACAAATGTCAGCAACTTTTGATTGTCGAGTTAAGTGATAAACTTGAAAAAACCGAGAAAAGTCTTGAAGAAACTGAGCAGTCATTATTTGATCTTGAGGAAAAGCACACACAAGCAAATGCAACAATTAAGGAAAAGGAATTTCTAATATCGAATCTACTGAAATCTGAAAAAGCACTTGTGGAGCATGCAATTGAGCTACGAGCTGATCTAGAGAATGCTGCATCGGATGTGTCAAAGCTGTTTTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAATAGAATACTTGTCCAGAAATTCCAGTCTCAGTTAGCTCAACAGCTAGAAGATTTGCACAAGACGGTTGCAGCATCGGTAATTCAACAAGAGCAGCAACTAAAGGAAATGGAAAATGATATGGATTCTTTTGTATCAACAAAGGCAGAGGCTATTGAAAATCTAAGAGCGCGGGTAGGAAAATTTAAAAACATGTATGGTTCTGGCATTAAAGCTTTGGGCAATTTAGCTGAGGAGTTTAAAGGAAATAGTGAGTTAACTTTTGAAGAGTTGAATTCTGAAGTAGCCAAGCATTCATCTGCCTTGGAGAATCTTTTTCAAGGAATTGCATTAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCAAAAAGCAAGAGGCCAAGTTAACTGCTTATGCTCGACAACAGGAAGAGGCACATGCCAGAGCAGAGGAGAATACACGTGCAGTATCTAAAATAACTGTGAACTTCTTTGAGACATTACACATGCATGCATCCAATATGATCCAAATTGTAGAAGAATCGCAATTTACCAATGATAAAAAATTGTATGAACTTCAAAAGAAGTTTGAGGAGTGTACTGCGCATGAAGAAAAACAACTACTGGAGAAAGTGGCAGAAATGCTTGCTAGCTCTAGTTCTAGAAAGAAAAAACTGGTCCAAATGGCAGTTAATGATCTTCGGGAAAGTGCAAACACTAAAATCAGTAGGCTGAGGCAAGAAACATTAACCATGCAAGATTCCACTTCTTCTGTTAAATCTGAATGGAAACTTCACATGGAAAAAACAGAGTCCAACTATCATGAGGATACTTCTGCAGTAGAATCTGGAAAGAATGACCTTGTGGAGGTTATTCGGCACTGCCGCAAAAAGGCAGAAGTAGGTGCACAACAATGGAGAAATGCTCAAGAATCCATACTTAGCCTGGAGAAGATAAATGCTGCTTCTGTGAATGCTATTATTCGGGGAGGAATGGAAGCTAATCATCTCCTACGAGACCGATTCTCAAGTGCTGTGTCAACTACACTTGAAGATGCAGAAATCGCAAACAAGGATATTAATTCTTCCATTGAACATTCATTGCAACTTGATCATGACGCTTGTGGGAATCTAAACTCTATGATTATCCCATGCTGTGGTGACTTGAGAGAATTGAAGGGGGGTCATTACCACAGAATTGTAGAGATAACTGAAAATGCAGGGAAATGTCTTCTCAGTGAATACACGGTAGATGAACCATCTTGTTCAACACCAAGAAAGAGATCCTTCAATTTACCCAGTGTTTCATCCATAGAAGAACTAAGAACCCCGTCATTTGAGGAACTACTGAAATCCTTCTGGGATGCAAAATCTCCAAAACATGCAAATGGTGATGTTAGATATATTGGGGCATATGAAGCTGCTCAATCCGTAAGAGATTCCAGAGTTCCTCTTATAGCAATTAATTAA 3150 0.4073 MEAQQRRGGLVPLSPSQTPRSGDKLARDLRSADSNSSGHSKFDKDKGVNVQVLVRCRPLSEDEARLNTPIVISCNEGRREVSAVQNIANKQIDRTFAFDKVFGPNSKQKELFEQAMSPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYSMKVTFLELYNEEITDLLAPEETLKFVDDKSKKPIALMEDGKGGVFVRGLEEEVVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVDHSGHVPYRDSKLTRLLRDSLGGKTKTCIVATISPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMVKSALIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLHEEAEKKAMVEKIERMELEAESKDKQLMELQELYKCQQLLIVELSDKLEKTEKSLEETEQSLFDLEEKHTQANATIKEKEFLISNLLKSEKALVEHAIELRADLENAASDVSKLFSKIERKDKIEEGNRILVQKFQSQLAQQLEDLHKTVAASVIQQEQQLKEMENDMDSFVSTKAEAIENLRARVGKFKNMYGSGIKALGNLAEEFKGNSELTFEELNSEVAKHSSALENLFQGIALEADSLLNDLQSSLKKQEAKLTAYARQQEEAHARAEENTRAVSKITVNFFETLHMHASNMIQIVEESQFTNDKKLYELQKKFEECTAHEEKQLLEKVAEMLASSSSRKKKLVQMAVNDLRESANTKISRLRQETLTMQDSTSSVKSEWKLHMEKTESNYHEDTSAVESGKNDLVEVIRHCRKKAEVGAQQWRNAQESILSLEKINAASVNAIIRGGMEANHLLRDRFSSAVSTTLEDAEIANKDINSSIEHSLQLDHDACGNLNSMIIPCCGDLRELKGGHYHRIVEITENAGKCLLSEYTVDEPSCSTPRKRSFNLPSVSSIEELRTPSFEELLKSFWDAKSPKHANGDVRYIGAYEAAQSVRDSRVPLIAIN* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1234 1049 Coils Coil 675 709 - -
Gso11g1234 1049 Coils Coil 407 427 - -
Gso11g1234 1049 Coils Coil 437 471 - -
Gso11g1234 1049 Gene3D Kinesin motor domain 45 431 IPR036961 -
Gso11g1234 1049 Coils Coil 479 513 - -
Gso11g1234 1049 Pfam Kinesin motor domain 55 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 MobiDBLite consensus disorder prediction 1 43 - -
Gso11g1234 1049 ProSiteProfiles Kinesin motor domain profile. 49 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 SMART kinesin_4 47 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 CDD KISc_BimC_Eg5 47 400 - -
Gso11g1234 1049 Coils Coil 592 619 - -
Gso11g1234 1049 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1049 - -
Gso11g1234 1049 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso11g1234 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 431 IPR027417 -
Gso11g1234 1049 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso11g1234 1049 PANTHER KINESIN-LIKE PROTEIN KIN-5D 1 1049 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1234 Gso-Chr11 11221897 11228124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1234 49 454 Miscellaneous Gene Families AT5G06670 36.534 3.43e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1234 K10398 - gmx:100784725 1994.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0608 12 5605934 5612237 Gso11g1234 11 11221897 11228124 GST
Gso15g0378 15 3407942 3414416 Gso11g1234 11 11221897 11228124 PCT
Gso11g3424 11 50184075 50190844 Gso11g1234 11 11221897 11228124 PCT
Gso11g1234 11 11221897 11228124 Gso15g0378 15 3407942 3414416 PCT
Gso11g1234 11 11221897 11228124 Gso11g3424 11 50184075 50190844 PCT