Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0591 ATGAGAACAAGCAACCACTTGATCGGTCTTCTGAACTTCCTAACGTTCCTGCTGTCGATTCCGATCCTAGGTGGCGGAATATGGCTGAGCAGCAGGGCCAACAACACCGACTGCCTCAAGTTCCTGCAGTGGCCGCTCATCATCATCGGAGTCAGCATCATGGTCGTGTCCCTCGCGGGGTTCGCCGGCGCGTGCTACCGCAACACCTTCCTCATGCGCCTCTACCTCGTCGTCATGTTCCTCGTCATCGCCGTCCTCATCGGGTTCATCATATTCGCCTACGTTGTCACTGACAAAGGCTCCGGTCGGAGGGTCATGAACCGCGCGTACTTGGAGTACTACCTCGAGGACTATTCGGGGTGGTTGGAGGAGCGCGTGGCGAGTGAGAGCTACTGGGGAAAGATTGCTTCGTGTATTAGGGATTCTAAAGTGTGTGGTAGGATGGGGAGAACCGTTAATGGGATGCCCCAAACTCCTGATATGTTCTACCTCACCCACCTCACGCCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGATTGTGGATATGTGTATCAGAATGAGACAGTGTGGATCCCAGGATCAGGATTGATGGGAACCAACGCAGATTGCACAAGGTGGAGCAATGACCAAGAGCAGCTTTGCTATGCCTGTGATTCTTGCAAGGCTGGTGTGCTGGCAAGTCTCAAGAAGAGTTGGAGGAAGGTCTCAGTGATCAACATTGTTGTTATGATCATCCTTGTGATTGTTTACATAATTGCTTATGCAGCATATAGAAACAACCGCAAGATGGATAACGATGAGCCCTATGGTGAAGCAAGGATGACAAAGGCACAACCTAGTGCTTTTCATCTTTAG 858 0.5128 MRTSNHLIGLLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLMRLYLVVMFLVIAVLIGFIIFAYVVTDKGSGRRVMNRAYLEYYLEDYSGWLEERVASESYWGKIASCIRDSKVCGRMGRTVNGMPQTPDMFYLTHLTPIQSGCCKPPTDCGYVYQNETVWIPGSGLMGTNADCTRWSNDQEQLCYACDSCKAGVLASLKKSWRKVSVINIVVMIILVIVYIIAYAAYRNNRKMDNDEPYGEARMTKAQPSAFHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0591 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
Gso12g0591 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Gso12g0591 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Gso12g0591 285 PRINTS Transmembrane four family signature 6 29 - -
Gso12g0591 285 PRINTS Transmembrane four family signature 39 65 - -
Gso12g0591 285 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0591 Gso-Chr12 5338305 5342807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0591 1 277 Miscellaneous Gene Families AT5G60220 72.563 1.46e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0591 - - gmx:100798336 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0591 12 5338305 5342807 Gso11g1250 11 11525353 11530939 GST
Gso11g3403 11 49932325 49935675 Gso12g0591 12 5338305 5342807 PCT
Gso12g0591 12 5338305 5342807 Gso11g3403 11 49932325 49935675 PCT