Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0523 ATGAGCACACCCTTGTTCCATGAATTCAAAAGGCAAGCTTCTTTCTTCTTCAAGGAGAAAATCAAGACTGCTAGATTAGCACTAACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACAAGTGGAAATCCATGGGCCCCAGATGCCAGAACTCTCAGATCAATTTCAAGGGATGCTTTTGAGCTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGTTTCTTAAATTTGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAGCACCTGTTGACTCATGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAGATGTCATTAGCCAGATGAAAGGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTGAGAAAGAAATCTGAGAGGATAACGAAACTGCTGGAAGAAGGGACTCTTCTCAAGGAAGAGAGAAAAAATGCTAGAAGGTTATCTAGAGGGATTGAAGGTTTTGGAAGTTTTTCTCATTTGTCAACTCAGGGACAAGGCGTTCTACGTGAGAGATCGTTGCCATCCACGCTTAGGAGATATGATTCAGACTTGAACAACCGTGAAGATCTGGAAAACCAGTCCTCTTGTTTAAACAATGGTGTGGATGTGGACACAGTAGCTGTTAAATTTCCAAGCCATCAAGGTGGAACCTTCAAGTCATTGGGTAGTGTGGAAGCCAAGGGATATCAGGATGATGATCTTGGCAACAACAATCAAATGCTTCAGAAATCTGAAACAAGTTCTAAAGAAAACATGGAGCCTAGCAAGGAGGAGTTCCATCTATGGAACTTGAATGGGGAGTCCAAACCAATTTTGGATTGGGGTGAAGAGGACTCCAAGCTTGGAATCATCAGAACAGAAGATGATCACCCCTTTAGTTCAACAGAAATGCATGTCACTGCCTCCTTGCTTTCTGCTTGCTAG 978 0.4254 MSTPLFHEFKRQASFFFKEKIKTARLALTDVTPAELMTEEATSGNPWAPDARTLRSISRDAFELDDYWRIVEILHKRFLKFEKKNWRVSYNSLIVLEHLLTHGPESVAEEFKSDKDVISQMKGFQYIDDTGFNWGLTVRKKSERITKLLEEGTLLKEERKNARRLSRGIEGFGSFSHLSTQGQGVLRERSLPSTLRRYDSDLNNREDLENQSSCLNNGVDVDTVAVKFPSHQGGTFKSLGSVEAKGYQDDDLGNNNQMLQKSETSSKENMEPSKEEFHLWNLNGESKPILDWGEEDSKLGIIRTEDDHPFSSTEMHVTASLLSAC* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0523 325 SMART enth_2 32 159 IPR013809 -
Gso12g0523 325 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
Gso12g0523 325 Pfam ENTH domain 32 153 IPR013809 -
Gso12g0523 325 MobiDBLite consensus disorder prediction 247 274 - -
Gso12g0523 325 Gene3D - 28 175 IPR008942 -
Gso12g0523 325 MobiDBLite consensus disorder prediction 250 266 - -
Gso12g0523 325 CDD ENTH 34 150 - -
Gso12g0523 325 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Gso12g0523 325 PANTHER EPSIN-2-LIKE 4 324 - -
Gso12g0523 325 PANTHER EPSIN/ENT-RELATED 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0523 Gso-Chr12 4677676 4679636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0523 K12471 - gmx:100816643 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0523 12 4677676 4679636 Gso11g1184 11 10649900 10651846 GST
Gso15g0341 15 3058250 3060266 Gso12g0523 12 4677676 4679636 PCT
Gso11g3468 11 50597752 50599653 Gso12g0523 12 4677676 4679636 PCT
Gso12g0523 12 4677676 4679636 Gso15g0341 15 3058250 3060266 PCT
Gso12g0523 12 4677676 4679636 Gso11g3468 11 50597752 50599653 PCT