Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1184 ATGTCCATAGCGTTGAACAAAACTAACAGCAGCAAAATGAGCACACCCTTGTTCCATGAATTCAAAAAGCAAGCTTCTTTCTTCTTCAAGGAGAAAATTAAGACTGCTAGATTAGCTCTAACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACAAGTGGAAATCCATGGGCCCCAGATGCCAGAACTCTCAGATCAATTTCAAGGGATGCTTTTGAGCTAGACGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGTTTCTTAAATTTGAAAAGAAGAATTGGAGGATCTCTTACAATTCCCTGATCGTGCTTGAGCACTTGTTGACTCATGGACCAGAGAGTGTTGCGGAGGAATTTAAGAGTGACAAAGATGTCATTAGCCAAATGAAAGGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTGAGAAAGAAATCTGAGAGGATAATGAAACTGCTGGAAAAAGGGACTCTTCTCAAGGAAGAGAGAAAAAATGCTAGAAGGTTATCTAGAGGGATTGAAGGTTTCGGAAGTTTCTCTCATCGGTCAACTCCGGCACAAGGTGTTCTACGTGAGAAATCATTGCCAACCACACTTAAGAGATATGACTCAGACTTAAACAACCATGAAGATCAGGAAAACCATTCCTCTTGTTCAAACAATGTTGTGAATGTGGACACAGTGGCTGTCAAATCTCCTAGCCATCAAGGTGAAACTTTTAAGTCATTGGGTAGTGTGGAAGCCAAGGAATACCAGGATGATGATCTTGGCAACAATCAAATGCTTCCGAAATCTGAAACAAGTTCTAAAGAAAACATGGAGCCTAGCAAGGAGGAGTTCCATCTATGGAACTTGAATGGGGAGTCCAAAGCACTTTTGGATTGTGGTGAAGAGGATTCCAAGCTTGGAATCATCAGAACAGAAGATGATCACCCCTTCAGTTCAGCAGAAATGCATGCCACTGCCTCTTTGCTTTCGGCTTGCTAG 1011 0.4194 MSIALNKTNSSKMSTPLFHEFKKQASFFFKEKIKTARLALTDVTPAELMTEEATSGNPWAPDARTLRSISRDAFELDDYWRIVEILHKRFLKFEKKNWRISYNSLIVLEHLLTHGPESVAEEFKSDKDVISQMKGFQYIDDTGFNWGLTVRKKSERIMKLLEKGTLLKEERKNARRLSRGIEGFGSFSHRSTPAQGVLREKSLPTTLKRYDSDLNNHEDQENHSSCSNNVVNVDTVAVKSPSHQGETFKSLGSVEAKEYQDDDLGNNQMLPKSETSSKENMEPSKEEFHLWNLNGESKALLDCGEEDSKLGIIRTEDDHPFSSAEMHATASLLSAC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1184 336 SMART enth_2 44 171 IPR013809 -
Gso11g1184 336 SUPERFAMILY ENTH/VHS domain 24 171 IPR008942 -
Gso11g1184 336 CDD ENTH 46 162 - -
Gso11g1184 336 ProSiteProfiles ENTH domain profile. 38 171 IPR013809 -
Gso11g1184 336 MobiDBLite consensus disorder prediction 259 284 - -
Gso11g1184 336 PANTHER EPSIN/ENT-RELATED 16 335 - -
Gso11g1184 336 Gene3D - 40 187 IPR008942 -
Gso11g1184 336 PANTHER EPSIN-2-LIKE 16 335 - -
Gso11g1184 336 Pfam ENTH domain 44 165 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1184 Gso-Chr11 10649900 10651846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1184 K12471 - gmx:100811093 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1184 11 10649900 10651846 Gso11g1184 11 10649900 10651846 ECH
Gso12g0523 12 4677676 4679636 Gso11g1184 11 10649900 10651846 GST
Gso15g0341 15 3058250 3060266 Gso11g1184 11 10649900 10651846 PCT
Gso11g3468 11 50597752 50599653 Gso11g1184 11 10649900 10651846 PCT
Gso11g1184 11 10649900 10651846 Gso15g0341 15 3058250 3060266 PCT
Gso11g1184 11 10649900 10651846 Gso11g3468 11 50597752 50599653 PCT