Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3468 ATGTCACTCATGTTGAACAAGAACAACAGCAGCAAAATGAGCATACCTTTGTTCCATGAGTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACCGCTAGGTTGGCTCTCACCGATGTTACCCCCACAGAGCTAATGACAGAAGAAGCTACAAAAGGAAATTCATGGGCCCCAGATCCCCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTAGATGATTATTTGAGAATAGTAGAGATTCTGCACAAAAGACTCCTTAAATTTGACAACAAGAATTGGAGGGCCTCTTACAATTCTCTGATTGTGCTGGAGTACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAAAGTGACAAAGATGTAATTGGCGAAATGAAATGCTTTCAGCATATTGATGACAGTGGGTTCAATTGGGGTCTAGCTGTTGGAAAGAAATCAGAACAGATATTGAAACTGCTGGAAGAAGGAACTCTCCTTAAGAAAGAAAGAAACCATGCTCGAAGGTTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCGGTCAACATTCAACTCAAGCACAAGGTGTTCTGCAGGAAAAATCATTGCCAACCACATTTGACAGACGTAACTCAGACTTCAATAACCATGAAAATCAGGAAAACCAATCCTTTGGCTCAAACCATTGTCTGGACACAGCAGCAGTTAAATCTGCTAGTCCAAGCTCTCAAGGTGGAATTTTCAAGTCCTTGGATGATAGTGCAGAAACTGAGAGCCACCTCGATGATCAGGGAAACATTCAAATGCACCAGAAATCTGAAACAAGCTCTGAAGAAAACATGACACCTAGCAAGGAGGAATTCCATCTATGGAACTTGAAAGGGGAGTCTAATCCACTTTTGGATGGTAGCCAAGAGAATGATTCTAGACTTGGGATGTTCATAGCCGAAGATGATCACCCCTTTGACTCTACAGAAATGCCTGCCACTTCTTCCCTACTTTCTTCTACGTGA 1014 0.4181 MSLMLNKNNSSKMSIPLFHEFKKQASFFLKEKFKTARLALTDVTPTELMTEEATKGNSWAPDPPTLRSISRAAFELDDYLRIVEILHKRLLKFDNKNWRASYNSLIVLEYLLTHGPESVAEEFQSDKDVIGEMKCFQHIDDSGFNWGLAVGKKSEQILKLLEEGTLLKKERNHARRLSRGIQGFGSFGQHSTQAQGVLQEKSLPTTFDRRNSDFNNHENQENQSFGSNHCLDTAAVKSASPSSQGGIFKSLDDSAETESHLDDQGNIQMHQKSETSSEENMTPSKEEFHLWNLKGESNPLLDGSQENDSRLGMFIAEDDHPFDSTEMPATSSLLSST* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3468 337 PANTHER EPSIN-2-LIKE 16 336 - -
Gso11g3468 337 PANTHER EPSIN/ENT-RELATED 16 336 - -
Gso11g3468 337 MobiDBLite consensus disorder prediction 236 250 - -
Gso11g3468 337 MobiDBLite consensus disorder prediction 236 337 - -
Gso11g3468 337 CDD ENTH 46 162 - -
Gso11g3468 337 Pfam ENTH domain 44 165 IPR013809 -
Gso11g3468 337 Gene3D - 40 187 IPR008942 -
Gso11g3468 337 SUPERFAMILY ENTH/VHS domain 24 171 IPR008942 -
Gso11g3468 337 ProSiteProfiles ENTH domain profile. 38 171 IPR013809 -
Gso11g3468 337 SMART enth_2 44 171 IPR013809 -
Gso11g3468 337 MobiDBLite consensus disorder prediction 207 226 - -
Gso11g3468 337 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3468 Gso-Chr11 50597752 50599653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3468 K12471 - gmx:100787788 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0341 15 3058250 3060266 Gso11g3468 11 50597752 50599653 GST
Gso11g3468 11 50597752 50599653 Gso12g0523 12 4677676 4679636 PCT
Gso11g3468 11 50597752 50599653 Gso11g1184 11 10649900 10651846 PCT
Gso12g0523 12 4677676 4679636 Gso11g3468 11 50597752 50599653 PCT
Gso11g1184 11 10649900 10651846 Gso11g3468 11 50597752 50599653 PCT