Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0462 ATGGCAAGAGTTTGGCTCACGGCGCCGCTAACGGCGCTGTTACTGTTCGCATTCTCCTCCGCCGTTAGTTCGTGTCCGCCGTCGGACCTGGCGGCGCTGCTGGCCTTCAAATCCGCTGTCCGGGAGTCCAACGGCGGAATATTCAACTCGTGGACCGGCACCGACTGCTGCCGCAACTGGTACGGCGTCTCCTGCGACCGCAACTCTCGCCGCGTCGCCGAGATCAGCCTCCGCGCCGGTCCCGTCTACACCACCTTCGAGAAGCCCTTCCGTCCGGGCTACATGTCCGGTTCCATCTCGCCGGAGATTTGCAAGCTCACGTACCTCTCCAGCATCATCATCACCGACTGGCAGGGAATCTCCGGCGAGATCCCGCGCTGCATCACCTCCCTCTCCTTCCTCCGCATCATCGACCTCACCGGAAACCGAATCTCCGGCACTCTCCCCGCCGACATCGGAAGGCTCCGGTACCTGACTCTGCTCAGCGCCGCCGACAACGTCATCGCCGGCGAAATCCCGCCGTCGCTGACGAGTGTGACCGGTTTGATGTATCTTGACCTCCGTAACAACCAGATCTCCGGGCCCATCCCACAAAGCCTGGGCCGGCTTCAAATGCTGAGCCGTGTCCTTTTAAGCGGGAACCAAATTAGTGGGCCCATTCCGCGCTCATTCTGTGATATATATCGTCTCGTGGATCTTGACCTCTCTAATAACCGTTTGCTCGGGCCCATCCCTGAAGCCTTGGGCCGAATGAAGGTTCTGTCAACGTTGAAGTTGGATAATAACAGGCTTTCGGGAAGTATACCAGCGAGCCTTTTGGGCTCGGGTATTAGCGAGTTGAACTTGAGCCACAATTATTTGGAGGGTAATATACCTGACTCGTTTGGAGGTACCTCTTATTTCACGTTACTGGACTTATCCTATAATAACCTCAGGGGCCCAATACCCAAATCCATGTCTTCCTCTTCCTACGTTGGGTTTTTGGACTTTAGCCACAACCACCTCTGCGGTCCAATTCCAAGCAGCTACAGTGATGCCGATGCGTCGTCGTTTGATTACAATGATTGCCTCTGTGGGAAGCCACTCAAAGCTTGCTAA 1098 0.561 MARVWLTAPLTALLLFAFSSAVSSCPPSDLAALLAFKSAVRESNGGIFNSWTGTDCCRNWYGVSCDRNSRRVAEISLRAGPVYTTFEKPFRPGYMSGSISPEICKLTYLSSIIITDWQGISGEIPRCITSLSFLRIIDLTGNRISGTLPADIGRLRYLTLLSAADNVIAGEIPPSLTSVTGLMYLDLRNNQISGPIPQSLGRLQMLSRVLLSGNQISGPIPRSFCDIYRLVDLDLSNNRLLGPIPEALGRMKVLSTLKLDNNRLSGSIPASLLGSGISELNLSHNYLEGNIPDSFGGTSYFTLLDLSYNNLRGPIPKSMSSSSYVGFLDFSHNHLCGPIPSSYSDADASSFDYNDCLCGKPLKAC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0462 365 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gso12g0462 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Gso12g0462 365 Gene3D Ribonuclease Inhibitor 93 365 IPR032675 -
Gso12g0462 365 SUPERFAMILY L domain-like 24 340 - -
Gso12g0462 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 3 365 - -
Gso12g0462 365 Gene3D Ribonuclease Inhibitor 23 90 IPR032675 -
Gso12g0462 365 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 365 - -
Gso12g0462 365 Pfam Leucine rich repeat 277 335 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0462 Gso-Chr12 4083195 4084609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0462 110 365 Receptor kinase-like Gene Family AT4G08850 35.338 3.73e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0462 - - gmx:100804365 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0462 12 4083195 4084609 Gso11g1118 11 10052153 10053586 GST
Gso11g3514 11 50989322 50991237 Gso12g0462 12 4083195 4084609 PCT
Gso12g0462 12 4083195 4084609 Gso11g3514 11 50989322 50991237 PCT