Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1118 ATGCACAAATCGCGCATCTCTAAATTTTCTTTTTCCCTCTTCTCAAAACCTTCATACTACAATACAATGGGTAGAGTTTGGTTCACGGCGCCGTTGACGGCGCTGTTACTGCTCGCATTTTCCTCCGCGGTTAGTTCGTGTCCACAGTCGGACCTGGCGGCGCTGTTGGCCTTCAAATCCGCTCTCCGGGAGTCCAACGACGGCATATTCAACACGTGGACCGGCACCGACTGCTGCCACAACTGGTACGGCATCTCCTGCGACCGCAACACCCACCGCGTCGCCGAGATCAGCCTCCGCGCCGGTCCCGTCTACACCACCTTCGAGAAGCCCTTCCGTCCTGGCTACATGTCCGGTTCCATCTCGCCGGAGATTTGCAAGCTCACTCACCTCTCCAGCATCATCATCACCGATTGGCAGGGAATCTCCGGCGAGATCCCGCGCTGCATCACCTCCCTCTTCTTCCTCCGCATCATCGACCTCACCGGAAACCGCATCGCCGGCACTCTCCCCTCCAACATCGGAAGACTTCGCCATCTGACTCTTCTCAGCGCCGCCGATAACGTCATCGCCGGCATAATCCCGCCGTCGCTAACCAACGTGACCGGTTTGATGCATCTTGACCTCCGTAACAACCGGATCTTCGGGCCCATCCCACGAAGCCTGGGCCGGCTTCAAATGCTGAGCCGCGTCCTTTTAAGCGGGAACCATATTAGTGGGCCCATCCCGCGTTCATTCTGTCATATATATCGTCTGGTGGATCTGGACCTCTCTAATAACCGTTTATCTGGGTCCATCCCTGAAGCTTTGGGCCGAATGAAGGTACTATCGACGTTGAAGTTGGACTCTAACAGGCTTTCGGGAAGTATACCGGCGAGCCTTTTGGGCTCGGGTATCAGTGAGTTGAACTTGAGCCACAATTATTTGGAGGGAAATATACCTGACTCGTTTGGAGGTAGCTCTTATTTCACGTTACTGGACTTATCGTATAATAACCTCAAGGGCCCAATACCCAAATCCATGTCTTCCTCTTCCTACGTTGGGTTTGTGGACTTTAGCCACAACCACCTCTGCGGCCCAATTCCCAGCAGCTACAGTGATGCCGATGCGTCGTCGTTTGATTACAACGATTGCCTTTGTGGAAAGCCACTCAAAGCTTGCTAA 1164 0.5395 MHKSRISKFSFSLFSKPSYYNTMGRVWFTAPLTALLLLAFSSAVSSCPQSDLAALLAFKSALRESNDGIFNTWTGTDCCHNWYGISCDRNTHRVAEISLRAGPVYTTFEKPFRPGYMSGSISPEICKLTHLSSIIITDWQGISGEIPRCITSLFFLRIIDLTGNRIAGTLPSNIGRLRHLTLLSAADNVIAGIIPPSLTNVTGLMHLDLRNNRIFGPIPRSLGRLQMLSRVLLSGNHISGPIPRSFCHIYRLVDLDLSNNRLSGSIPEALGRMKVLSTLKLDSNRLSGSIPASLLGSGISELNLSHNYLEGNIPDSFGGSSYFTLLDLSYNNLKGPIPKSMSSSSYVGFVDFSHNHLCGPIPSSYSDADASSFDYNDCLCGKPLKAC* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1118 387 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 25 387 - -
Gso11g1118 387 Gene3D Ribonuclease Inhibitor 115 387 IPR032675 -
Gso11g1118 387 Gene3D Ribonuclease Inhibitor 43 113 IPR032675 -
Gso11g1118 387 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 25 387 - -
Gso11g1118 387 Pfam Leucine Rich Repeat 301 318 IPR001611 GO:0005515
Gso11g1118 387 Pfam Leucine Rich Repeat 204 224 IPR001611 GO:0005515
Gso11g1118 387 SUPERFAMILY L domain-like 46 362 - -
Gso11g1118 387 Pfam Leucine rich repeat N-terminal domain 49 88 IPR013210 -
Gso11g1118 387 Pfam Leucine rich repeat 228 286 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1118 Gso-Chr11 10052153 10053586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1118 133 387 Receptor kinase-like Gene Family AT4G08850 36.981 4.87e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1118 - - gmx:100791273 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1118 11 10052153 10053586 Gso11g1118 11 10052153 10053586 ECH
Gso12g0462 12 4083195 4084609 Gso11g1118 11 10052153 10053586 GST
Gso11g3514 11 50989322 50991237 Gso11g1118 11 10052153 10053586 PCT
Gso11g1118 11 10052153 10053586 Gso11g3514 11 50989322 50991237 PCT