Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3589 ATGGCCATATCTCCAATTTTGTTGTTGGCTATCTTATCTCTCATTTATGGCAATGGTGTTCTTCCCATTGAAGCTACCCATCATGTTTACAGAAATCTTCAGACTCTATCTTCTGATTCCTCTGATCAACCTTATAGAACTGCTTACCATTTCCAACCTCGCAAAAATTGGATAAATGACCCTAATGGACCAATGAGGTACAAAGGACTTTACCATCTGTTCTATCAATACAATCCAAAAGGTGCCGTATGGGGCAATATTGTCTGGGCCCACTCAATATCAAATGATCTTGTGAATTGGACTCCACTGGATCATGCCATCTACCCTTCTCAACCGTCTGATATAAACGGTTGTTGGTCAGGCTCAGCCACAATACTCCCTGGGGGCAAGCCAGCCATTTTATACACAGGAATTAACCCTAATAAGCACCAAGTTCAAAACTTAGCCATACCCAAAAACATGTCTGACCCATTACTTAGGGAATGGGTTAAGTCACCCAAAAATCCACTAATGGCACCAACTAGTTCTAACAATATCAATTCAAGCTCATTTAGGGACCCTACCACTGCTTGGCTAGGAAAAGATGGATACTGGAGGGTGCTGATTGGAAGCAAAATACACACTAGGGGTATGGCAATTTTGTACAAGAGCAAAAACTTTGTTAATTGGGTTCAAGCCAAACAACCCCTACATTCAGCTGAAGGCACTGGAATGTGGGAGTGCCCTGATTTCTATCCAGTGCTGGATAATAAGGGCCCATCAACTATTGGTCTTGACACATCTGTGAATGGTGATAATGTTAGGCATGTGCTTAAGGTTAGTTTGGATGATACAAAACATGATCATTATTTGATTGGGACTTATGACATTGCCAAGGATATCTTCACTCCGGATAACGGATTTGAGGATAGCCAAACTGTCTTAAGATATGACTATGGAAAATATTATGCCTCAAAAACGATTTTTGAAGATGGAAAAAACAGAAGGGTCTTATTGGGTTGGGTTAACGAATCCTCAAGTGTTCCGGATGATATCAAGAAAGGATGGGCTGGAATCCATACCATTCCAAGGGCCATCTGGCTTCATAAATCTGGGAAACAGTTGGTGCAATGGCCGGTGGTGGAACTTGAAAGCTTGCGTGTGAACCCTGTCCACTGGCCCACCAAAGTGGTCAAAGGTGGTGAAATGCTTCAAGTTACTGGTGTCACTGCGGCACAGGCTGACGTTGAAATTTCATTTGAAGTGAATGAGTTTGGAAAGGCCGAAGTATTGGACAAATGGGTGGATCCCCAAATTCTGTGTAGTAGAAAGGGGGCAGCCGTAAAGGGTGGTTTGGGACCCTTTGGCTTGCTAGTTTTTGCTTCTCGTGGCTTACAAGAGTACACGGCAGTGTTCTTTAGAATATTCAGATACCAAAATAAAAATTTGGTTCTCATGTGTAGCGACCAAAGCAGATCCTCTTTGAATAAAGATAACGATATGACCACCTATGGGACTTTTGTGGACATGGACCCTCTTCATGAGAAGCTGTCACTAAGAACTTTGATTGATCGCTCAGTAGTGGAGAGTTTTGGAGGAGAGGGAATGGCTTGCATCACAGCCAGAGTATATCCCACAATAGCAATTAATAAAAAGGCACAACTATATGCTTTCAATAATGGAACTGCCGCTGTCAAGATCACAAGATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGA 1725 0.4243 MAISPILLLAILSLIYGNGVLPIEATHHVYRNLQTLSSDSSDQPYRTAYHFQPRKNWINDPNGPMRYKGLYHLFYQYNPKGAVWGNIVWAHSISNDLVNWTPLDHAIYPSQPSDINGCWSGSATILPGGKPAILYTGINPNKHQVQNLAIPKNMSDPLLREWVKSPKNPLMAPTSSNNINSSSFRDPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFYPVLDNKGPSTIGLDTSVNGDNVRHVLKVSLDDTKHDHYLIGTYDIAKDIFTPDNGFEDSQTVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVPDDIKKGWAGIHTIPRAIWLHKSGKQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQADVEISFEVNEFGKAEVLDKWVDPQILCSRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKNLVLMCSDQSRSSLNKDNDMTTYGTFVDMDPLHEKLSLRTLIDRSVVESFGGEGMACITARVYPTIAINKKAQLYAFNNGTAAVKITRLSAWSMKKAKIN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3589 574 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 570 IPR013320 -
Gso11g3589 574 PANTHER CELL-WALL INVERTASE 2 574 - -
Gso11g3589 574 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 574 - -
Gso11g3589 574 Gene3D Glycosyl hydrolase domain; family 43 55 382 IPR023296 -
Gso11g3589 574 SMART glyco_32 50 528 IPR001362 GO:0004553|GO:0005975
Gso11g3589 574 Gene3D - 383 568 - -
Gso11g3589 574 Pfam Glycosyl hydrolases family 32 N-terminal domain 50 372 IPR013148 -
Gso11g3589 574 ProSitePatterns Glycosyl hydrolases family 32 active site. 50 63 IPR018053 GO:0004553|GO:0005975
Gso11g3589 574 CDD GH32_Fruct1-like 56 361 - -
Gso11g3589 574 Pfam Glycosyl hydrolases family 32 C terminal 375 567 IPR013189 -
Gso11g3589 574 SUPERFAMILY Arabinanase/levansucrase/invertase 41 373 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3589 Gso-Chr11 51587669 51591040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3589 65 574 Glycoside Hydrolase AT3G13790 63.900 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3589 K01193 - gmx:100783003 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0219 15 2003633 2007256 Gso11g3589 11 51587669 51591040 GST
Gso11g3589 11 51587669 51591040 Gso7g0075 7 649220 654113 PCT
Gso11g3589 11 51587669 51591040 Gso8g1588 8 15532464 15537398 PCT
Gso7g0075 7 649220 654113 Gso11g3589 11 51587669 51591040 PCT
Gso8g1588 8 15532464 15537398 Gso11g3589 11 51587669 51591040 PCT