Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3490 ATGCCTCTGCCTGCAGAACGCACGTACAGATATGTTGACACTTCAAGAAGTCCTACCGCCATCATTAGCGTGGAACAATTCCTTCGAGCTACACCAGGAGGGGAGTCTTGTAGGAAGTCACCAACCTACTCTCCCACCTCGTCTTCCCCTTCCTCTCCTTACTTTGAGAAGTTGAAGAACCAAGACCCAGAAGAAGACCATGGCCTCTATCAGAAGAAATCAGTCCTCACCAAAGTAAAGGAGAGGGCCAGGAAATTCCGCTACAGCCTCAGCAAGAGAAGAATGGATGACGACAACGTCACACCCTCTTGGGGTGTTAGCTTAGAAGAGGATGAGGAAGAAGACCCTGAATACCTTGGAGCTCCAATGTATGAATCAGAGCTGGCACCTGAGGAATACAAAGAATATGCAAGGCAACATCCAAGAGCAAATCCAGTAATCTCTGAGAAGCATGTTTTGCACAACGCTGTCAAATTAGGAGCGGAGCAGGATCAACAGAAGTCACGTGGTGCTGTCAGTGCCAGGTTCACGACAACAACTCCAAACATGACATCTGAAACCACAGCTCAGAAACTGACACCTGTCTATGTTGGAGTGTCAAATGCAGCTAATGCTATATCCTCCAAAATTCAAGCTGTTTCTAGTTCCACAACTGCTCCTGCAGCCAACGACATGTCCTCACATACCTCATCACTTCCATCATCTTCAATGCAAAATTCATCATCCGCTTCCCTGAGTGGGAAGAATACATCTTGCCAAAAGAGTGCTTCTCTCAGAGATAATTTGATGAACCAGTGTGAACAAGGTGATAGAGCCCGAAATGTGCCTACAATGCAAAAATCATCATCCTTATCTGCTTCGATGACTGAGAATAAGAATATTACAAGCCTAATGAGTGCTTCAGTTAAAGATTATTCAATGAACAAGTCTGAGCCAAGGGATGATGCAAAAACTGTGTCTCAGCCTCAGGTGATGATATCTGAAGCAACGAGTCCTAAGAGAACTTCTAGTAATGCAGGTGTGATGGACAAGGTGAGAGGAGCTGTGAATTCATTGCTGGGGAATGAGGAACCATCACAACAATATGGAGTCAAAACTCCTACTACACGCACTTCGTCACAGCAAACTCAACAAGTTGATCAGGAAGAGAACCGTAGGAGAATTCTACAGGAAAATTGA 1179 0.4512 MPLPAERTYRYVDTSRSPTAIISVEQFLRATPGGESCRKSPTYSPTSSSPSSPYFEKLKNQDPEEDHGLYQKKSVLTKVKERARKFRYSLSKRRMDDDNVTPSWGVSLEEDEEEDPEYLGAPMYESELAPEEYKEYARQHPRANPVISEKHVLHNAVKLGAEQDQQKSRGAVSARFTTTTPNMTSETTAQKLTPVYVGVSNAANAISSKIQAVSSSTTAPAANDMSSHTSSLPSSSMQNSSSASLSGKNTSCQKSASLRDNLMNQCEQGDRARNVPTMQKSSSLSASMTENKNITSLMSASVKDYSMNKSEPRDDAKTVSQPQVMISEATSPKRTSSNAGVMDKVRGAVNSLLGNEEPSQQYGVKTPTTRTSSQQTQQVDQEENRRRILQEN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3490 392 MobiDBLite consensus disorder prediction 58 73 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 37 56 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 353 379 - -
Gso11g3490 392 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 392 IPR037491 GO:0009737
Gso11g3490 392 MobiDBLite consensus disorder prediction 327 392 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 30 73 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 219 252 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 87 119 - -
Gso11g3490 392 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 1 392 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 268 289 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 160 185 - -
Gso11g3490 392 MobiDBLite consensus disorder prediction 166 185 - -
Gso11g3490 392 Coils Coil 372 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3490 Gso-Chr11 50785462 50787501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3490 - - gmx:102664483 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0315 15 2849628 2851799 Gso11g3490 11 50785462 50787501 GST
Gso11g3490 11 50785462 50787501 Gso12g0661 12 6453833 6461747 PCT
Gso11g3490 11 50785462 50787501 Gso11g1157 11 10372647 10375150 PCT
Gso12g0661 12 6453833 6461747 Gso11g3490 11 50785462 50787501 PCT
Gso11g1157 11 10372647 10375150 Gso11g3490 11 50785462 50787501 PCT