Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1157 ATGGCTCAACTCGAACGCCCTCAAAGACAGGTTGAGACTCCAAAAACCCCCCCTACCATCCACACCATGGAACAACTCCTCCGAGAAGGAGAATCCAAGTCTAAGCAGTCACCAACCTACTCCTCCTCCTCCTCCATGAACTCTTCTCCATCCTCCCCTTTCTTCCAAAGGTTGAGGCACCATGACTCAGAAGAAGACCATGGCCAGAATCAGAAGAAATCAGTTCTCACCAAGGTGAAGGAGAAGGCCAAGAAACTTCGCCACAGCCTCAGCAAGAGGAAACACGAGGACGGCAACCCCACTAGTCCCTCATCAGCTACTGGCGTAGAAGGCGATGGAGCAGAAGAAGATGCTGAATACCTCGGAGCTCCTATGTACGGTTCGGAGAAGTCACCTGCAGGATACGAAGCATATGTAAGGCAGCAGAATTCAAGTCCAAGAGGAAATCTAGTATTCCCAGAGAAGCATATGTTATCAAGCAGTGACAAACACGTGGTTGAACCGGATCATCAAGAAAAGACACTAAGCCGCTCCATGTCTAAGAAGACAACAACAACCTCTTCTCCAAATGCTACTACTTCTAACATTAATACTAATACTCTTTCTGGTCTAAACAAGACAATCGTAGCAAAGAAACCAACACCAGTTCATGTTGAAAAACCGGATGCATCCCATATAACCTCCAAAATCCAAGGCCTTACTGTGTCGAAACCCACAGAACATCATGATCACACTTCACCATCATCAACAACAGTTCAGACAATTCGCAACACTTCTTTGTCCTATGCTGCTCCATTCACTCCCCCTGCAAAGTTACCCTCCCAAGCTCCTTCAATTACTCCGCGAACTACACCGGCTCCGGTGACACCAGAACCTTCATCTGCTCCTGCATTTAGTGGGAAGAGCACAAGCCCCACCGCGCAAATACAGGACAAGGGTGTGTCGATGAAAGAGTACTTGCTGAACAAATTGGAGCCAGGGGAAGACGAGAAGGCGCTGTCTCAGATGATATCTGAAGCAATGAGTCCAAGGAGAACTCCCGGTGATGTAGGCGTGATGGAGAAGGTGAGAGAAGCTGTAACTTCTTTGCTCCGAACTGAGGAACCAACAAAATATGCAGACACGACTACTACTACTCCTACTCGCATGTCGTGTCAAAGCCCGAAGGCTTCTTGCGCTTCATCTCAAATGCCAGCATCTATCAGCGCTTCTCGCTCTTCATCTCAAATCCCGCTATCTTTCAACGCTCAACAAGACTATGAAGTGGCTGAGGAAGAAAACCATGGCCGGATTCTTCAGGCAAATTGA 1308 0.4794 MAQLERPQRQVETPKTPPTIHTMEQLLREGESKSKQSPTYSSSSSMNSSPSSPFFQRLRHHDSEEDHGQNQKKSVLTKVKEKAKKLRHSLSKRKHEDGNPTSPSSATGVEGDGAEEDAEYLGAPMYGSEKSPAGYEAYVRQQNSSPRGNLVFPEKHMLSSSDKHVVEPDHQEKTLSRSMSKKTTTTSSPNATTSNINTNTLSGLNKTIVAKKPTPVHVEKPDASHITSKIQGLTVSKPTEHHDHTSPSSTTVQTIRNTSLSYAAPFTPPAKLPSQAPSITPRTTPAPVTPEPSSAPAFSGKSTSPTAQIQDKGVSMKEYLLNKLEPGEDEKALSQMISEAMSPRRTPGDVGVMEKVREAVTSLLRTEEPTKYADTTTTTPTRMSCQSPKASCASSQMPASISASRSSSQIPLSFNAQQDYEVAEEENHGRILQAN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1157 435 MobiDBLite consensus disorder prediction 157 177 - -
Gso11g1157 435 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 26 435 IPR037491 GO:0009737
Gso11g1157 435 MobiDBLite consensus disorder prediction 57 77 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 178 204 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 368 412 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 295 311 - -
Gso11g1157 435 PANTHER LOW-TEMPERATURE-INDUCED PROTEIN 26 435 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 32 56 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 1 204 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 366 412 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 245 264 - -
Gso11g1157 435 MobiDBLite consensus disorder prediction 235 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1157 Gso-Chr11 10372647 10375150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1157 - - gmx:102667939 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0661 12 6453833 6461747 Gso11g1157 11 10372647 10375150 GST
Gso15g0315 15 2849628 2851799 Gso11g1157 11 10372647 10375150 PCT
Gso11g3490 11 50785462 50787501 Gso11g1157 11 10372647 10375150 PCT
Gso11g1157 11 10372647 10375150 Gso15g0315 15 2849628 2851799 PCT
Gso11g1157 11 10372647 10375150 Gso11g3490 11 50785462 50787501 PCT