Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3436 ATGGAGATGTTGGCCAAGAAAGTATACGAAGGCAATGGTGGGTCCTACTATTCATGGTCCCCCGCCGAGCTTCCCCAAGGCAACATTGGTGCCGCCAAGCTTGCTCTCGACAAAAACGGCTTCGCTCTTCCTCGTTACTCTGACGATCCTTTACGACCATCTGGAGTGGCTGGAATAGTGCTGCTGTCTGACTCAGAAGAGAAGGTTGTTGCAATCAAGAAGGTTTTTTCTGACTGGTTCCAATGGAATCTTCACCGTAGGGTTTTGGAGACAACCGTGAAAGCTGTTAATTTGTTCATTGTGCCAAGGTTCTTTGTGGTCTCAAAGATTGCTGATCCTGATGGACTCGAGTGGTTCTCTATCATCTCCACCCCTAATACTATATTTACCCACTTGGCTGGAAGTTCTTCCGTGTGGAAGGCTTTATCACCTTCGGTTCTGCAAGCTGCTTTCAATGTAGATCCAGAAGTTGAGCAACTGTTCCGTTCAAAGAGGACTGCCGATGCCATTTTCTTCCCTCCACCAAACTAG 531 0.4765 MEMLAKKVYEGNGGSYYSWSPAELPQGNIGAAKLALDKNGFALPRYSDDPLRPSGVAGIVLLSDSEEKVVAIKKVFSDWFQWNLHRRVLETTVKAVNLFIVPRFFVVSKIADPDGLEWFSIISTPNTIFTHLAGSSSVWKALSPSVLQAAFNVDPEVEQLFRSKRTADAIFFPPPN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3436 176 PANTHER - 4 74 - -
Gso11g3436 176 PANTHER - 86 167 - -
Gso11g3436 176 PRINTS 11-S seed storage protein family signature 96 111 IPR006044 GO:0045735
Gso11g3436 176 PRINTS 11-S seed storage protein family signature 114 132 IPR006044 GO:0045735
Gso11g3436 176 PRINTS 11-S seed storage protein family signature 136 153 IPR006044 GO:0045735
Gso11g3436 176 SUPERFAMILY RmlC-like cupins 7 166 IPR011051 -
Gso11g3436 176 PANTHER OS03G0336100 PROTEIN-RELATED 86 167 - -
Gso11g3436 176 PANTHER OS03G0336100 PROTEIN-RELATED 4 74 - -
Gso11g3436 176 Pfam Cupin 6 158 IPR006045 -
Gso11g3436 176 Gene3D Jelly Rolls 83 176 IPR014710 -
Gso11g3436 176 SMART Cupin_1_3 2 159 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3436 Gso-Chr11 50324602 50326385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3436 - - gsj:114373393 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0368 15 3309092 3311504 Gso11g3436 11 50324602 50326385 GST
Gso11g3436 11 50324602 50326385 Gso12g0551 12 4935133 4938186 PCT
Gso11g3436 11 50324602 50326385 Gso11g1217 11 10997978 11000227 PCT
Gso12g0551 12 4935133 4938186 Gso11g3436 11 50324602 50326385 PCT
Gso11g1217 11 10997978 11000227 Gso11g3436 11 50324602 50326385 PCT