Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3330 ATGGGGTTTTCTAGTTATTTCTTGACTTCCTTGCTTCTGGTTGTAGTGTTCAATGTGGCTAAAGGGCAGCCTCTGGTCCCTGCCCTGTTCATATTTGGGGACTCTGTGGTTGATGTGGGAAATAATAACCACTTATACACCGTTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAAGAATCACAATCCAACAGGGAGGTTTTGCAATGGAAAGCTTGCATCAGACTACACAGCTGAAAACCTTGGATTTACCTCTTACCCACCAGCTTACCTCAACTTAAAGGCCAAAGGAAATAACCTCTTGAATGGTGCCAACTTTGCCTCTGCTGCTTCAGGCTACTATGATCCCACAGCCAAGTTATATCATGCAATTCCATTGAGCCAACAGCTGGAACACTACAAAGAGTGCCAGAATATATTGGTGGGAACAGTAGGGCAGCCTAATGCTTCATCAATTATATCTGGTGCTATATATCTCATCAGTGCTGGGAACAGTGACTTTATTCAGAACTATTATATAAATCCACTGCTTTACAAGGTTTACACTGCTGATCAATTCTCAGACATTCTCTTGCAAAGCTATGCCACTTTCATTCAGAATTTATATGCACTTGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATGGGTTGTCTGCCAGCAGCCATCACTCTCTTTGGCTCTGATAGCAACCGTTGTGTGGTTAAACTAAATAATGATTCTGTTAACTTCAATAAGAAGCTAAATACCACATCTCAGAGCTTGCAAAAATCTCTTTCGGGTCTCAAATTGGTCATCCTTGATATCTACCAACCTCTCTATGACCTTGTCACTAAACCTTCTGAAAATGGATTTTTTGAAGCAAGGAAGGCTTGCTGTGGAACAGGCTTGCTAGAAACATCTGTATTGTGCAATCAGAAGTCCATAGGAACATGTGCCAATGCATCTGAATACGTATTTTGGGATGGTTTTCATCCCTCTGATGCTGCAAACAAGGTTTTGTCAGATGACTTGTTGGCTGCTGGCATCTCTCTCATATCCTAA 1053 0.4188 MGFSSYFLTSLLLVVVFNVAKGQPLVPALFIFGDSVVDVGNNNHLYTVVKANFPPYGRDFKNHNPTGRFCNGKLASDYTAENLGFTSYPPAYLNLKAKGNNLLNGANFASAASGYYDPTAKLYHAIPLSQQLEHYKECQNILVGTVGQPNASSIISGAIYLISAGNSDFIQNYYINPLLYKVYTADQFSDILLQSYATFIQNLYALGARRIGVTSLPPMGCLPAAITLFGSDSNRCVVKLNNDSVNFNKKLNTTSQSLQKSLSGLKLVILDIYQPLYDLVTKPSENGFFEARKACCGTGLLETSVLCNQKSIGTCANASEYVFWDGFHPSDAANKVLSDDLLAAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3330 350 PANTHER GDSL-MOTIF LIPASE 8 349 - -
Gso11g3330 350 SUPERFAMILY SGNH hydrolase 29 341 - -
Gso11g3330 350 Gene3D SGNH hydrolase 17 346 IPR036514 -
Gso11g3330 350 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
Gso11g3330 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Gso11g3330 350 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3330 Gso-Chr11 49094750 49096877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3330 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.129 1.69e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3330 - - gmx:100804640 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1512 12 38508102 38509996 Gso11g3330 11 49094750 49096877 GST
Gso11g3330 11 49094750 49096877 Gso11g1436 11 16606767 16610240 PCT
Gso11g1436 11 16606767 16610240 Gso11g3330 11 49094750 49096877 PCT