Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1436 ATGTCAAGTATGGGGTATTCAAGGTCTTTCTTGGCTTCTTTTCTTCTTGCTGTGTTGCTCAATGTGACTAATGGGCAGCCTCTAGTCCCTGCAATTTTCACATTTGGGGACTCAATTGTAGATGTTGGCAATAATAACCACCAATTGACTATTGTTAAAGCAAACTTCCCTCCTTATGGAAGGGACTTTGAGAATCACTTTCCAACAGGAAGGTTCTGCAATGGAAAGCTTGCAACAGACTTCATTGCTGATATCCTTGGATTTACCTCTTATCAACCAGCCTACCTCAACTTAAAGACCAAAGGAAAGAACCTCTTGAATGGTGCCAACTTTGCCTCAGCTTCTTCTGGTTACTTTGAATTGACATCCAAACTATATAGTTCAATTCCATTGAGCAAGCAGCTTGAATGCTACAAGGAGTGCCAGACCAAATTGGTGGAAGCAGCAGGGCAATCAAGTGCTTCATCAATTATATCTGATGCTATATATCTTATTAGTGCTGGGACCAGTGATTTTGTTCAGAACTACTACATAAATCCTCTGCTTAACAAGCTTTATACAACTGATCAATTCTCAGACACTCTCTTGCGATGCTATTCCAATTTCATCCAGAGTTTATATGCATTGGGAGCAAGGAGGATTGGTGTGACATCATTACCTCCAATTGGTTGCCTTCCTGCAGTCATCACTCTCTTCGGTGCTCATATCAACGAATGTGTGACCAGTTTAAACAGTGATGCAATTAACTTCAATGAAAAGCTCAACACCACATCTCAGAACTTAAAAAATATGCTTCCAGGCCTCAATTTGGTCGTCTTTGATATCTACCAACCCCTCTACGACTTGGCCACCAAGCCTTCTGAAAACGGATTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACGGGGTTGATAGAGGTATCTATTTTGTGCAATAAGAAGTCCATAGGAACATGTGCTAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCAGAGGCTGCAAACAAGGTTTTGGCGGATGAATTGATTACTTCTGGCATCTCTCTTATATCCTAA 1062 0.4096 MSSMGYSRSFLASFLLAVLLNVTNGQPLVPAIFTFGDSIVDVGNNNHQLTIVKANFPPYGRDFENHFPTGRFCNGKLATDFIADILGFTSYQPAYLNLKTKGKNLLNGANFASASSGYFELTSKLYSSIPLSKQLECYKECQTKLVEAAGQSSASSIISDAIYLISAGTSDFVQNYYINPLLNKLYTTDQFSDTLLRCYSNFIQSLYALGARRIGVTSLPPIGCLPAVITLFGAHINECVTSLNSDAINFNEKLNTTSQNLKNMLPGLNLVVFDIYQPLYDLATKPSENGFFEARKACCGTGLIEVSILCNKKSIGTCANASEYVFWDGFHPSEAANKVLADELITSGISLIS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1436 353 CDD SGNH_plant_lipase_like 30 346 IPR035669 -
Gso11g1436 353 PANTHER GDSL-MOTIF LIPASE 13 352 - -
Gso11g1436 353 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
Gso11g1436 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Gso11g1436 353 PANTHER GDSL ESTERASE/LIPASE EXL3 13 352 - -
Gso11g1436 353 SUPERFAMILY SGNH hydrolase 32 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1436 Gso-Chr11 16606767 16610240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1436 27 344 Acyl Lipid Metabolism Gene Families AT4G10950 34.268 3.18e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1436 - - gmx:100775618 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1436 11 16606767 16610240 Gso11g1436 11 16606767 16610240 ECH
Gso12g1512 12 38508102 38509996 Gso11g1436 11 16606767 16610240 PCT
Gso11g3330 11 49094750 49096877 Gso11g1436 11 16606767 16610240 PCT
Gso11g1436 11 16606767 16610240 Gso12g1512 12 38508102 38509996 PCT
Gso11g1436 11 16606767 16610240 Gso11g3330 11 49094750 49096877 PCT