Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3317 ATGCAGAGTCTTTCACCACCTACTTCCAACGCGCTCAATTTGAAGCATGTTTTTCGCCCGCGACTTGGCGCGTCAAGCCGAATCTCTGTCAAATGCGCTTTTGGGTTTGAGCCGGTGAGCTACGGAGTCGGCTCCAGCCGAGCCGATTGGCAGAGCTCCTGCGCCATCTTAGCCAGCAAGGTCGTTTCTCAGGAACAACCCTCCGCTGACCAGAACAGCGGCACCACCGACCACATCGCCGCCGTCAACGGTCACAAAGCCGCCGTCAGCGACTTCCAACTCGTTCCAATTGGAAACCTAGCAGAGGCCAACAACAAGCCGCTCCCGCCGAAGCCGCTCACGATCTCCGACCTCTCGCCGGCCCCGATGCACGGCTCCAAGCTCCGCGTCGCGTACCAAGGCGTTCCCGGCGCGTACTCTGAAGCCGCTGCCGGCAAGGCCTATCCGAACTGCGAGGCCATTCCGTGCGACCAGTTCGAGGTGGCGTTCCAGGCGGTGGAGCTCTGGATCGCCGATCGGGCGGTTTTACCGGTTGAAAACTCACTCGGCGGTTCGATCCACCGGAACTACGATCTCCTCCTCCGCCACCGCCTTCACATAGTTGGCGAGGTCCAGCTCCCGGTCCATCACTGCCTCCTCGCTCTCCCCGGCGTCCGAAAGGAGTTCCTCACGCGCGTGATTTCGCATCCGCAGGCACTCGCGCAGTGCGAGCACACTCTCACCAAACTCGGCCTGAACGTGGCGCGCGAGGCCGTGGACGACACCGCCGGCGCTGCCGAGTTCGTCGCCAGCAACAATCTCCGCGACACCGCCGCCATCGCGAGCGCACGCGCGGCGGAGCTCTACGGCCTGAACGTGATGGCGGACGGAATCCAAGACGATCCGAGCAACGTCACGCGGTTTGTGATGCTCGCGAGAGAGCCTATCATCCCGCGCACGGACCGTCCTTTCAAGACGAGCATTGTTTTCGCACACGACAAAGGAACTTCGGTGCTTTTCAAAGTGCTTTCCGCGTTCGCGTTTCGCAACATCAGTTTGACGAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATTAGGCTGGTGGATGACGCGAACGTTGGAACCGCGAAGCACTTTGAGTACTTGTTCTACGTTGATTTTGAGGCTTCCATGGCTGAGGTTAGGGCACAGAACGCGTTGGCAGAGGTGCAGGAATTCACGTCTTTCTTGCGAGTGTTAGGGAGTTACCCTATGGACATGACACCCTGGACACCTTCCTCCCGGGGAGACTAG 1275 0.6047 MQSLSPPTSNALNLKHVFRPRLGASSRISVKCAFGFEPVSYGVGSSRADWQSSCAILASKVVSQEQPSADQNSGTTDHIAAVNGHKAAVSDFQLVPIGNLAEANNKPLPPKPLTISDLSPAPMHGSKLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVASNNLRDTAAIASARAAELYGLNVMADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGD* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3317 424 Gene3D - 124 212 - -
Gso11g3317 424 ProSitePatterns Prephenate dehydratase signature 1. 282 304 IPR018528 GO:0004664|GO:0009094
Gso11g3317 424 Gene3D - 213 294 - -
Gso11g3317 424 Gene3D - 313 414 - -
Gso11g3317 424 ProSiteProfiles ACT domain profile. 320 411 IPR002912 -
Gso11g3317 424 PANTHER AROGENATE DEHYDRATASE 31 421 - -
Gso11g3317 424 SUPERFAMILY Periplasmic binding protein-like II 129 312 - -
Gso11g3317 424 CDD ACT_CM-PDT 318 411 - -
Gso11g3317 424 ProSitePatterns Prephenate dehydratase signature 2. 346 353 IPR018528 GO:0004664|GO:0009094
Gso11g3317 424 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 31 421 - -
Gso11g3317 424 CDD PBP2_Ct-PDT_like 127 308 - -
Gso11g3317 424 SUPERFAMILY ACT-like 301 413 IPR045865 -
Gso11g3317 424 Pfam Prephenate dehydratase 130 308 IPR001086 GO:0004664|GO:0009094
Gso11g3317 424 ProSiteProfiles Prephenate dehydratase domain profile. 129 306 IPR001086 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3317 Gso-Chr11 48958062 48959903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3317 K05359 - gmx:100781285 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1528 12 38701173 38703140 Gso11g3317 11 48958062 48959903 GST
Gso11g3317 11 48958062 48959903 Gso12g0695 12 6927513 6929361 PCT
Gso11g3317 11 48958062 48959903 Gso11g1423 11 16386437 16388400 PCT
Gso12g0695 12 6927513 6929361 Gso11g3317 11 48958062 48959903 PCT
Gso11g1423 11 16386437 16388400 Gso11g3317 11 48958062 48959903 PCT