Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3289 ATGCCCAAGAACATCAGATCAGCAATGGCAACCTCTTCTTTCTTCTTCACCTTGCTATTACTGCTTCTCACTGTTTCAGATTTGTTTGTGCAAAGCCGTGGCCTTAATTTTGGAATCAACTACGGGCAAATAGCCAACAACCTTCCATCTCCATCTCGTGTGGCTGTTCTAATAAAATCTCTGAATGTATCCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTGGAATTCATCATAGGACTAGGGAACGAGTATCTGCAGAGCATGAGAGACCCTTCTAAGGCTCAGAGCTGGGTTCAACAGCATGTTCAGCCTTACATTTCACAAACCAGAATCACTTGCATCACTGTAGGAAATGAGGTATTCAACTACAATGATACACAGCTCACAGCAAATCTTCTCCCAGCAATGCAAAGTGTGTATAATGCCCTTGTTAATCTAGGACTAGCACAACAAGTTACTGTTACGACTGCTCATTCTTTCAACATTTTAGCCAATTCTTTTCCTCCTTCATCTGGGGCATTCAGGCAAGATCTGATACAATACATTCAACCCCTCCTTAGCTTTCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCCTTTTTTGCATACAAGGACAATCCAAACCAAATCTCCTTGAACTATGTGCTATTTCAGCCAAATCAAGGGGCCACTGATCCAAACACCAATTTACATTATGATAACATGTTGTATGCTCAGATTGATGCTGTCTACGCCGCCATCAAAGCGCTGGGACATACCGATGTTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCCCAGAATGCAGAAATATATAATAGTAATTTATTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCTAATCCATCTGTTCCAATTGATATTTTTGTCTTTGCACTTTTCAATGAGAATTTGAAGCCTGGTCCTGTTTCTGAGAGAAACTATGGCCTTTATTATCCTGATGGTACCCCAGTTTATAACATTGGATTAGAAGGTTATCTCCCAGAAATGGTTATAGAGTCCAAATCTAACGCTTTGTCCACCAATTTTCTCATCTACATATTTACATGTTTGTTGTTCATTTGGGAGCTTTCAAGACCGTGA 1179 0.4088 MPKNIRSAMATSSFFFTLLLLLLTVSDLFVQSRGLNFGINYGQIANNLPSPSRVAVLIKSLNVSRIKLYDADPNVLSAFSNSDVEFIIGLGNEYLQSMRDPSKAQSWVQQHVQPYISQTRITCITVGNEVFNYNDTQLTANLLPAMQSVYNALVNLGLAQQVTVTTAHSFNILANSFPPSSGAFRQDLIQYIQPLLSFHAQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNQGATDPNTNLHYDNMLYAQIDAVYAAIKALGHTDVEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIEQKQGTPANPSVPIDIFVFALFNENLKPGPVSERNYGLYYPDGTPVYNIGLEGYLPEMVIESKSNALSTNFLIYIFTCLLFIWELSRP* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3289 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 371 IPR044965 GO:0004553|GO:0005975
Gso11g3289 392 Pfam Glycosyl hydrolases family 17 38 353 IPR000490 GO:0004553|GO:0005975
Gso11g3289 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 13 371 - -
Gso11g3289 392 SUPERFAMILY (Trans)glycosidases 37 353 IPR017853 -
Gso11g3289 392 Gene3D Glycosidases 36 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3289 Gso-Chr11 48698910 48703843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3289 87 387 Glycoside Hydrolase AT2G27500 66.887 1.92e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3289 - - gmx:100786020 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1559 12 39072687 39076723 Gso11g3289 11 48698910 48703843 GST
Gso11g3289 11 48698910 48703843 Gso12g0727 12 7363353 7367766 PCT
Gso11g3289 11 48698910 48703843 Gso11g1385 11 15800367 15807516 PCT
Gso12g0727 12 7363353 7367766 Gso11g3289 11 48698910 48703843 PCT
Gso11g1385 11 15800367 15807516 Gso11g3289 11 48698910 48703843 PCT