Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1385 ATGTTTGACCATTTGTCGCACGTGCCATCCCGGTGGTATATCAGCCGGTTCTCATGGAGTCGTTCGTTGCTCAACACGTGGGCTTCCCTAAGATCCCGGGGGGGAAAGAGTAAAGAGATATCAGCATACTCAATGGCGGAACTTGACCATAATTTTTGGAGGAACCAAAATGTTTCTGTGCCTAGAAGCGTGGCGTGGTGGTCTCAATTGGTGTCTATGGCCATGATGATCAGATCAGTAATGACAAGTTGTTCCTTCTTCATATCAATGCTTTTGTTTCTTTTCACCATTTCAGATTTGTTTGTGCAAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGGCAACAATTTACCTCCTCCATCTCAAGTTGCTGTTCTTATAAAATCTATGAATGTGAGTAGGATCAGGCTCTATGATTCTGATCCAAATGTTCTACTAGCCTTCTCTCAATCCAATGTGGAATTCGTAATAGGACTTGGAAATGACTACCTAGAGAACATGACAAACCCTTCTAAATTTCAAACATGGATTCAGCAGCATGTTCAACCTTACCTCTCTCAGACCAAAATCACTTGCATCACAGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCAAATGTTGAATCTTCTCCCAGCAATGCAAAGTGTGCATGATGCCCTTGTTAATCTTGGACTAGACAAACATGTAACCGTCACAACCGCCCATTCATTCAACATATTATCCAATTCCTACCCTCCTTCATCCGGGGCATTTAGGGAAGATCTTGTGCAATATATCCAACCCCTTCTTGACTTTCATGCTCAAATCAACTCACCTTTCCTCATCAATGCATACCCTTTCTTTGCATACAAAGATAACCCAGACGAAGTTTCCTTAAACTATGTGCTTTTTCAGCCAAGTGAAGGCATGATTGATCAAAACACCAATTTGCATTATGACAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAACAAATGGGGCATGACCATGATGTTCAAGTTAGGATTTCCGAGACCGGTTGGCCTTCTAATGGTGATCCGGACGAGGTTGGAGCTACACCGCAGAATGCAGCTTTGTATAATGGTAACTTGATCAAAAGGATACAGCAGAAACAAGGCACTCCTGCAAAACCATCTGTTCCAATTGACATATATGTCTTTGCACTTTTTAATGAGAATTTGAAGCCTGGTCCAGCATCAGAGAGAAACTATGGACTTTACTATCCTGATGGTACTCCAGTTTATAACATTGGATTGAAGGATTATCTCCAAGAGATTCCTATGGCAGCTAAATCCAATACTTTGTCTGTCAATTTTCTTGTATGTATAACTACATGCTTGATCTTTGCTTTGGAGCCTTCAAGATGGTGA 1398 0.4142 MFDHLSHVPSRWYISRFSWSRSLLNTWASLRSRGGKSKEISAYSMAELDHNFWRNQNVSVPRSVAWWSQLVSMAMMIRSVMTSCSFFISMLLFLFTISDLFVQIHGLGFGINYGQIGNNLPPPSQVAVLIKSMNVSRIRLYDSDPNVLLAFSQSNVEFVIGLGNDYLENMTNPSKFQTWIQQHVQPYLSQTKITCITVGNEVFNSNDTQQMLNLLPAMQSVHDALVNLGLDKHVTVTTAHSFNILSNSYPPSSGAFREDLVQYIQPLLDFHAQINSPFLINAYPFFAYKDNPDEVSLNYVLFQPSEGMIDQNTNLHYDNMLYAQIDAVYAAIKQMGHDHDVQVRISETGWPSNGDPDEVGATPQNAALYNGNLIKRIQQKQGTPAKPSVPIDIYVFALFNENLKPGPASERNYGLYYPDGTPVYNIGLKDYLQEIPMAAKSNTLSVNFLVCITTCLIFALEPSRW* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1385 465 Gene3D Glycosidases 108 434 - -
Gso11g1385 465 SUPERFAMILY (Trans)glycosidases 109 427 IPR017853 -
Gso11g1385 465 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 85 442 IPR044965 GO:0004553|GO:0005975
Gso11g1385 465 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 85 442 - -
Gso11g1385 465 Pfam Glycosyl hydrolases family 17 110 426 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1385 Gso-Chr11 15800367 15807516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1385 159 446 Glycoside Hydrolase AT2G27500 67.474 1.28e-150 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1385 - - gsj:114375232 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1385 11 15800367 15807516 Gso11g1385 11 15800367 15807516 ECH
Gso12g0727 12 7363353 7367766 Gso11g1385 11 15800367 15807516 GST
Gso12g1559 12 39072687 39076723 Gso11g1385 11 15800367 15807516 PCT
Gso11g3289 11 48698910 48703843 Gso11g1385 11 15800367 15807516 PCT
Gso11g1385 11 15800367 15807516 Gso12g1559 12 39072687 39076723 PCT
Gso11g1385 11 15800367 15807516 Gso11g3289 11 48698910 48703843 PCT