Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0655 ATGGCCTCTTCAGCTCAATTTTCCACCACTTTGGTCGTACTATGTCTCTTCCAATTCCTAGCAGGTTCATATTCAACGACATTCACAATTGTGAACAAGTGCAGCTACACAGTTTGGCCCGGCATTTTAACCGGCGCCGGAACCTCACCGCTCTCCACCACCGGCTTCGTCTTACAACCCGGCGAGTCCAACGTGATCACCGTGCCGGCCGCCTGGTCCGGCCGCCTCTGGGGGCGGACCGTCTGCACCCAAGACGCCACCGGAAAATTCTCCTGCGTCACAGGCGACTGCGGCTCCTCCGCCGTGGAATGCAACGGCGCAGGAGCCGCCCCGCCGGCCACGCTCGCCGAGTTCACACTGAACGGCGCCGGCGGGCTTGATTTCTTCGACGTGAGCCTCGTCGACGGTTACAATCTCCCCATGATCGTGGAGCCACAGGGCGGAAGCGGCGCCGGAAACTGCAGCGCCACGGGGTGCGTGGTGGACTTAAACACGCCGTGCCCGACGGAGCTCAAGGTGATGAGCAGCGGAGATGGCGTGGCGTGCAAAAGCGCGTGTGAAGCATTCGATGATCCACAATACTGCTGTAGTGGCGCTTACGCGACGCCTGACACATGCAAACCCAGTTCATACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCTTACAGTTACGCTTATGACGATGGCTCCAGCACCTTCACTTGTGCCTCAGCGGATTATACCATCACTTTCTGCCCCCAGCCATCCACTAGTTCGATTAAATCGGGGAACGGGAAATACCCAATGGCGGTGGACACTTCGGGTGGTAATGTGGACGTAAGAAAAAACAATGTTATGGCGGTGATTGCTTATGTTTTGGTGGCATTTGTGGCAACTCAATTAGGTGGCCCTTCACTGCCAAAGTTGCATTAA 915 0.5705 MASSAQFSTTLVVLCLFQFLAGSYSTTFTIVNKCSYTVWPGILTGAGTSPLSTTGFVLQPGESNVITVPAAWSGRLWGRTVCTQDATGKFSCVTGDCGSSAVECNGAGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIVEPQGGSGAGNCSATGCVVDLNTPCPTELKVMSSGDGVACKSACEAFDDPQYCCSGAYATPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPQPSTSSIKSGNGKYPMAVDTSGGNVDVRKNNVMAVIAYVLVAFVATQLGGPSLPKLH* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0655 304 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Gso11g0655 304 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Gso11g0655 304 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Gso11g0655 304 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Gso11g0655 304 ProSiteProfiles Thaumatin family profile. 25 247 IPR001938 -
Gso11g0655 304 CDD TLP-PA 27 246 - -
Gso11g0655 304 PANTHER OS03G0233200 PROTEIN 8 267 IPR001938 -
Gso11g0655 304 PIRSF PR5 1 296 IPR001938 -
Gso11g0655 304 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 267 - -
Gso11g0655 304 Gene3D Thaumatin 26 247 IPR037176 -
Gso11g0655 304 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Gso11g0655 304 SMART tha2 28 247 IPR001938 -
Gso11g0655 304 Pfam Thaumatin family 32 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0655 Gso-Chr11 5886991 5888977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0655 7 252 Receptor kinase-like Gene Family AT5G38280 52.988 3.32e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0655 - - gmx:100806478 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0655 11 5886991 5888977 Gso11g0655 11 5886991 5888977 ECH
Gso11g0655 11 5886991 5888977 Gso2g0403 2 4278873 4281366 PCT
Gso11g0655 11 5886991 5888977 Gso16g1012 16 27841734 27844530 PCT
Gso2g0403 2 4278873 4281366 Gso11g0655 11 5886991 5888977 PCT
Gso16g1012 16 27841734 27844530 Gso11g0655 11 5886991 5888977 PCT