Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0568 ATGGAATCATTTCAAGGTTCAAGGGATGACATTTCCTACCAAATGGGTTTGATTTGGAGCCAAGTGAAGGAGCCAGTGATCGTGCCAATGCTGAGGGTGTCAGTGTTTCTGTGCTTGGCCATGTCGTTGATGATGCTGGTCGAGAGGGTGTACATGGGCATTGTCATTTGCTTGGTGAAGCTGTTTGGTCGAAGACCCGAGAAGCGTTACAAGTGGGAGCCTATGAAGGACGATGTTGAGTTGGGAAACTCTAGTTATCCCATGGTCTTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAACTATCAATTGGTGCAGCTTGTGGTCTTTCTTGGCCTTCAGACAGAATCATCATACAAGTTCTTGATGATTCTACTAACCCAACAATCAAGGAGCTGGTGCAAATGGAATGTAGTAGATGGGCGAGCAAAGGGGTGAACATAAAGTACGAGGTGAGGGACAACAGAGACGGGTACAAAGCAGGGGCTCTGAAAGAAGGCATGAAACGGAACTACGTGAAGCAATGTGACTATGTTGCCATCTTTGACGCGGATTTTCAACCGGACCCTGATTTCCTCTGGCGAACTGTCCCATTCCTTGTCAACAACCCTGAACTTGCTCTTGTTCAGGCACGTTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTCACTGTGGAACAAGAAGTGGGGTCTTGCACTTATGCCTTCTTTGGCTTCAACGGAACTGCTGGTGTATGGAGAATTTCGGCGCTGTATGAGTCTGGAGGGTGGAATCATAGGACCACAGTGGAAGATATGGACCTGGCTGTGCGAGCCAGTCTCAGAGGATGGAAATTCTTGTACCTGCCCAATTTGAAGGTTAAAAACGAATTACCAAGTACTTTGAATGCCTACCGTTTCCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCATGAAAATGTTCATGGAGATTATGAGAAACAGGAAAGTGTCCTTGTATAAGAAGATATATGTTATTTACAGCTTCTTCTTTGTCCGGAAGGTCGTGGCCCACATCAACACTTTTATGTTCTATTGCATTGTGTTACCCGCTACAGTTGTGGTGCCTGAGGTGGTTGTCCCCAAGTGGGGTGCTGTTTACATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTCCACTTGCTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGTCTGCTAGAGGGTAGTCGAGCGAATGAATGGATTGTCACTCAAAAGGGTAAACCACCCAAAAGTCGGTTCAGGATAAGGATTCATCATATGTTGGAACTTCTTGTTGGATTCTACCTCTTCTTCTGTGGCTGCTATGATATTATGTTCGGGAAAAACCGCTACTACATATTCCTATACATTCAATCAATTGCTTTCTTCATCATGGCCTTTGGATATGTTGGCATTTTCGATCCCAACTCCTAG 1536 0.4518 MESFQGSRDDISYQMGLIWSQVKEPVIVPMLRVSVFLCLAMSLMMLVERVYMGIVICLVKLFGRRPEKRYKWEPMKDDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTNPTIKELVQMECSRWASKGVNIKYEVRDNRDGYKAGALKEGMKRNYVKQCDYVAIFDADFQPDPDFLWRTVPFLVNNPELALVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSCTYAFFGFNGTAGVWRISALYESGGWNHRTTVEDMDLAVRASLRGWKFLYLPNLKVKNELPSTLNAYRFQQHRWSCGPANLFMKMFMEIMRNRKVSLYKKIYVIYSFFFVRKVVAHINTFMFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEGSRANEWIVTQKGKPPKSRFRIRIHHMLELLVGFYLFFCGCYDIMFGKNRYYIFLYIQSIAFFIMAFGYVGIFDPNS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0568 511 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 510 - -
Gso10g0568 511 Pfam Glycosyltransferase like family 2 88 322 - -
Gso10g0568 511 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 303 IPR029044 -
Gso10g0568 511 PANTHER - 1 510 - -
Gso10g0568 511 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 367 IPR029044 -
Gso10g0568 511 CDD CESA_CaSu_A2 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0568 Gso-Chr10 6426853 6433717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0568 2 510 Miscellaneous Gene Families AT5G03760 75.240 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0568 K13680 - gmx:100814280 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1580 19 44721548 44726975 Gso10g0568 10 6426853 6433717 PCT
Gso3g1599 3 41916629 41921601 Gso10g0568 10 6426853 6433717 PCT
Gso10g0568 10 6426853 6433717 Gso19g1580 19 44721548 44726975 PCT
Gso10g0568 10 6426853 6433717 Gso3g1599 3 41916629 41921601 PCT