Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0506 ATGTTCAAGAAAATCATGAAAGGCGGGCACAAGAAGCCCGCTAAGTCCGACGCCAGCGATCCGGTTCCGCCGCCGTACGCCGCCGCCAACCGTAGCGCTCCGGCGGCTCCCTCCGCCAATGCCGTCTCCAACCACGCCTCGCGCATCTCCTCGACCCCGCTGACACTCTCTTCCGGCGGCTCCATCGAGCCGGTGCCGCTGTTCCGCGACGCTCCTGTCGCGGAACGCCAGAACCTCTTCCTCCGGAAGCTCCACGTGTGCTGCTACGTCCTCGACTTCTCCGACACGCTGAAGAACGTTAGGGAGAAAGAAATCAAACGCCAGGCGCTCATGGACCTCGTCGATTTCATCCAATCCGGTTCCGGCAAGATAAACGAGAATTGCCAGGAAGAGATGATCAGGATGATCTCCGTCAACATTTTCCGGTGCCTCCCTCCGGCGTCGCACGAAAACACCGGCCAAGAACCCACCGATCCCGAGGAAGAAGAACCTTCCTTGGACCCTTCCTGGCCCCACCTTCAGCTCGTCTACGAACTTCTCCTCAGATACATTGTTTCCTCCGACACCGATACGAAAATCGCGAAACGGTACATCGATCACTCCTTCGTTCTTAAATTGCTCGATTTGTTTGACTCTGAGGACCCGCGCGAGAGAGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTGCATAGGCCCTTTATTAGGAAAGCTATTAACAACATTTTTTACCGGTTTATATATGAGACTGAGAGACACTCTGGCATTGGGGAGCTTCTGGAGATTCTCGGCAGCATTATTAATGGGTTTGCCTTGCCCATGAAGGAGGAGCACAAGTTGTTTCTTGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCGGTGGGGATGTATCATCAGCAGTTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTCGCCGATACGGTGATCAGGGGGTTGTTGAAGTATTGGCCGGTTACTAATTGCCAGAAGGAGGTTCTCTTCCTTGGAGAACTTGAGGAGGTGCTGGAGGCCACGCAGGCCGCGGAGTTTCAACGTTGCATGGTTCCTCTTTTTAGACAGATTTCGCGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTCTTCTTGTGGAATAACGAGCATATTGTGAGCTTAATTGCCCAAAACAGGACTGTGATACTACCGATAATATTTGAAGCATTTGAGAAAAATATTTCGAGTCATTGGAATCAGGCAGTGCATGGACTGACCGTGAATGTTCGCAAAATGTTCCTGGAAATGGACGCAGAATTGTTTGAAGAGTGCCAGCGGAAGCATGCAGAGAAAGAGGCTAAAGTCAAAGAACTAGCAGAGCAGCGGGAACTTAATTGGAAGAGACTGGCAGATGTGGCTGCACAGAACGGAGTGGAGGACATGGTCACTTAG 1461 0.5147 MFKKIMKGGHKKPAKSDASDPVPPPYAAANRSAPAAPSANAVSNHASRISSTPLTLSSGGSIEPVPLFRDAPVAERQNLFLRKLHVCCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKINENCQEEMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPSWPHLQLVYELLLRYIVSSDTDTKIAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVILPIIFEAFEKNISSHWNQAVHGLTVNVRKMFLEMDAELFEECQRKHAEKEAKVKELAEQRELNWKRLADVAAQNGVEDMVT* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0506 486 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 481 - -
Gso10g0506 486 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso10g0506 486 PIRSF PP2A_B56 4 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso10g0506 486 Coils Coil 444 464 - -
Gso10g0506 486 MobiDBLite consensus disorder prediction 148 167 - -
Gso10g0506 486 MobiDBLite consensus disorder prediction 1 44 - -
Gso10g0506 486 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 66 476 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso10g0506 486 Gene3D - 72 475 IPR011989 -
Gso10g0506 486 SUPERFAMILY ARM repeat 77 457 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0506 Gso-Chr10 5575942 5583249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0506 K11584 - gmx:100795277 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1540 19 44330117 44336203 Gso10g0506 10 5575942 5583249 PCT
Gso3g1560 3 41538915 41544568 Gso10g0506 10 5575942 5583249 PCT
Gso10g0506 10 5575942 5583249 Gso19g1540 19 44330117 44336203 PCT
Gso10g0506 10 5575942 5583249 Gso3g1560 3 41538915 41544568 PCT