Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0391 ATGCCATTTTGTAATTTTTTATCATTTGTTCTTGTCTTATTTTGGTTCAGTTGGAGAAGAACAATGAGAACAGAGTTGAAGAAGAAGATATCCAAGTCTTCGTGGCCAAAATTTAATGTAAGAAAGTGGCTCAATATTAGGAGCAACGATGATAACTTTCACTCAGATTACTCTTTACCAGAGGGGTGGCTGATGGACTCCACAAATGAATTGAAACATTCGGCATCAGTGATGGAGGCGCCACCTGTCAATGACACTGACACGCTCAACCTTAGGATGTTCGTGGGGACGTGGAATGTTGGAGGAAAGTCTCCGAACGAGGGATTGAACTTGAGGAATTGGTTGATGTTGCCTTCACCAACTGATATCTATGTCATCGGGTTCCAAGAAATTATACCTCTAAACGCAGGGAACGTGCTTGGACCAGAGGATAGTGGACCAGCATCGACGTGGTTGAACCTTATTCATCAAGCCTTGAACTCTAACACAAGCTCCTCCAGTGGAGAAAATTCTCCTACATGCAGTCCAAGTGAACATGAACAACAGCTCTATTATTGCCTAGCAGCAAGTAAACAAATGGTGGGTATCTTCTTGTGCTTGTGGGTACGTGCGGATCTTTACAAGCATGTCAGCAATTTAAAGGTGTCTTGTGTTGGTAGAGGCATCATGGGCTATCTTGGAAATAAGGGATCAATCTCAATTAGCATGACATTGTACCACACAACGTTCTGCTTCGTTTGTACCCACTTGGCCTCCGGAGAGAAAGATGGTGATGAGGTGCGAAGAAATTTGGACGTCTCAGAAATCTTAAAGAAAACTAAATTTTCACAATCATTCAAAGCTCTTGGTCAATCACTCCCTCCTGAAAGCATATTAGAGCATGATAAGATTATTTGGCTAGGGGATTTGAATTATCGGCTTACTGCTGGTTACGATGATACACTTGAGCTACTGAAGAAGAATGATTGGAAGGCACTATTAGAGAAGGACCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTGTTCAAAGAGTGGAAGGAAGGGAAGATATATTTTGCTCCAACTTACAAATACTTATTCGGTTCTGACCAGTATGTTGCCCAAACTAACAAGTCCAAAGAAAAACGACGAACTCCGGCTTGGTGCGATCGAATACTATGGAAAGGTGAAGGCGTGGAGCAGCTATGGTATGTGCGAGGAGAATCCAAATTCTCAGACCATAGGCCAGTGTATTCACTTTTCTCGGTTAACGTGGACTTAACATCTAACAAGCTAAGTCCTTCTATTGCTACATCAAATAGCAGCTCTATAATCTCAAGGTCGTGTTCCTCTAGACCCTTAACAAACGCTGCCTTGTCCTCATCTTGCTTTGCTAAAGTTCAGGCAGAGGAACAACTCTTGTTACTAACCAGGGCACATAGACACAGGGTTCTGACTTAG 1440 0.4285 MPFCNFLSFVLVLFWFSWRRTMRTELKKKISKSSWPKFNVRKWLNIRSNDDNFHSDYSLPEGWLMDSTNELKHSASVMEAPPVNDTDTLNLRMFVGTWNVGGKSPNEGLNLRNWLMLPSPTDIYVIGFQEIIPLNAGNVLGPEDSGPASTWLNLIHQALNSNTSSSSGENSPTCSPSEHEQQLYYCLAASKQMVGIFLCLWVRADLYKHVSNLKVSCVGRGIMGYLGNKGSISISMTLYHTTFCFVCTHLASGEKDGDEVRRNLDVSEILKKTKFSQSFKALGQSLPPESILEHDKIIWLGDLNYRLTAGYDDTLELLKKNDWKALLEKDQLRIEQRAGRVFKEWKEGKIYFAPTYKYLFGSDQYVAQTNKSKEKRRTPAWCDRILWKGEGVEQLWYVRGESKFSDHRPVYSLFSVNVDLTSNKLSPSIATSNSSSIISRSCSSRPLTNAALSSSCFAKVQAEEQLLLLTRAHRHRVLT* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0391 479 SUPERFAMILY DNase I-like 86 419 IPR036691 -
Gso10g0391 479 Gene3D Endonuclease/exonuclease/phosphatase 72 441 IPR036691 -
Gso10g0391 479 Pfam Endonuclease/Exonuclease/phosphatase family 96 407 IPR005135 GO:0003824
Gso10g0391 479 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 59 467 IPR045849 GO:0004445|GO:0046855
Gso10g0391 479 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 59 467 - -
Gso10g0391 479 SMART i5p_5 89 422 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0391 Gso-Chr10 4135230 4141981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0391 90 418 Acyl Lipid Metabolism Gene Families AT1G65580 31.217 3.10e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0391 - - gmx:100795297 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1446 19 43331751 43343649 Gso10g0391 10 4135230 4141981 PCT
Gso3g1456 3 40559619 40566285 Gso10g0391 10 4135230 4141981 PCT
Gso10g0391 10 4135230 4141981 Gso19g1446 19 43331751 43343649 PCT
Gso10g0391 10 4135230 4141981 Gso3g1456 3 40559619 40566285 PCT