Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0276 ATGAGCAAAATCCGTCTCTGCCAGAGGATTCTCCTCCTCTCTCTCTTCTTTCTCTCCGTCGTCGCTCCTCTCGTCTTCGTCTCTCACCGCCTCAACCTTCTCACTCTTCTCGGGAGAAGAGAGTTTCTCGAAGATTTATATCGCGCTACATACAGGGGAGATACTTTGAAGTTAAATGCTGTAGAACAGGAAGGTGCTGACGGATTAGAAGAGCCAAATCAAGTTGTTTATACGGAAAAGGATTTTGCTTCAACAATTAGTTACTATTCAGAAAAGAATAATGATTTTAAGGAATCTGGAATTGCAGGTTACAGAACTACCACTTTGGAAAGAAATGTTTCAGGATTCAACCCAGATAAAGGACAACGCCAGGGAGCTCAGCAGAATGAATTATCCTTCATGGCTCAAGGTAGGAACATACATGATTCACAGAGAATGTCAGAGAAGAATATTCAAGTTACAAATAAGAAGGTTCAAGAGATTAAGGATCAAGTTATTTTAGCCAAAGCATACTTGAAAATTGCACCACCAAGCAGCAATTTACGCTTGAGGGATTTGGAGCAGCTAACGAGAGAGATGGAATTAGCAGTTGGAGAAGCCACCCAGGATTCGGATCTGTCAACGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCCCTGTCTAAAGTCTATCGTGCTTTCCCAGACTGCTCTGCTCTGGGTGCTAAGCTTCATACAATGCTGCGTCAGGCTGAAGAGCAAGTCCGTTCTCAGAGACATCAAGCAACATATCTTGTTCATCTTGCTGCAAGGACTGCCCCAAAAGGCCTACACTGTCTTTCTATGCGGTTGACTGCAGAATACTTTGCCTTGAGGCCTGAGGAGAGAAAGCTTCCAAATGAAAATAAAATTTATCACCCTGACCTTTATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGCGGTTGTTAATTCTACTATCTCTACTGCCAAGGAACAGGAGAAACTTGTTTTCCATGTATTGACCAAATCACTCAACTTACCAGCAATCTCAATGTGGTTCTTAATAAATCCTCCTGCCAAAGCTACAGTCCACATACTGAGCATAGACAACTTTGAATGGTCGTCCAAGTACAATACCTACCAGGAAAATAATTCCAGCTATCCAAGATTCACTTCTGAACTGAACTACCTGCATTTCTACCTTCCAGACATTTTTCCTGCTTTAAATAAGATTGTACTTTTGGATCATGATGTGGTGGTGCAACAAGATCTCAGTGAACTATGGAATATCAATATGAAGGGAAACGTAATTGGAGCTGTTGGAACTTGTCAGGAAGGAAAAATCCCATTTTATAGGATTGATATGTTCATAAACTTGTCAGATCCATTAATTGGAAAGCGGTTTGATGCCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTGCAACAGTGGAGGAGACATAATTTAACTGCTGTCTATCAGAATTATGTGCAAATGGGTTTGTGGAACATTGGAAGTCTACCTTTAGGCTGGCTGACTTTCTATAATAAGACAGAGTTGTTGGATAGACAGTGGCATGTTCTTGGCCTTGGCTATAGTTCGGATGTTGATCGAAATGAGATTGAGCAGGCTTCCGTTATACACTATGATGGGCTTAGGAAGCCGTGGCTGGATATTGCAATGGGAAGATATAAAAGTTATTGGACCAAATTCTTGAATTTTGACAACATTTTTTTGCAACAGTGCAATCTCCAGGCATAG 1764 0.4144 MSKIRLCQRILLLSLFFLSVVAPLVFVSHRLNLLTLLGRREFLEDLYRATYRGDTLKLNAVEQEGADGLEEPNQVVYTEKDFASTISYYSEKNNDFKESGIAGYRTTTLERNVSGFNPDKGQRQGAQQNELSFMAQGRNIHDSQRMSEKNIQVTNKKVQEIKDQVILAKAYLKIAPPSSNLRLRDLEQLTREMELAVGEATQDSDLSTSALQKMRHMEASLSKVYRAFPDCSALGAKLHTMLRQAEEQVRSQRHQATYLVHLAARTAPKGLHCLSMRLTAEYFALRPEERKLPNENKIYHPDLYHYAVFSDNVLACAAVVNSTISTAKEQEKLVFHVLTKSLNLPAISMWFLINPPAKATVHILSIDNFEWSSKYNTYQENNSSYPRFTSELNYLHFYLPDIFPALNKIVLLDHDVVVQQDLSELWNINMKGNVIGAVGTCQEGKIPFYRIDMFINLSDPLIGKRFDANACTWAFGMNLFDLQQWRRHNLTAVYQNYVQMGLWNIGSLPLGWLTFYNKTELLDRQWHVLGLGYSSDVDRNEIEQASVIHYDGLRKPWLDIAMGRYKSYWTKFLNFDNIFLQQCNLQA* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0276 587 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 586 IPR029993 GO:0047262
Gso10g0276 587 PANTHER HEXOSYLTRANSFERASE 1 586 - -
Gso10g0276 587 Coils Coil 183 203 - -
Gso10g0276 587 SUPERFAMILY Nucleotide-diphospho-sugar transferases 304 584 IPR029044 -
Gso10g0276 587 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 306 579 IPR029044 -
Gso10g0276 587 Pfam Glycosyl transferase family 8 273 561 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0276 Gso-Chr10 2908006 2913249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0276 1 587 Glycosyltransferase AT1G06780 47.805 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0276 K13648 - gmx:100819088 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1172 2 14634340 14639858 Gso10g0276 10 2908006 2913249 GST
Gso19g1343 19 42130088 42136979 Gso10g0276 10 2908006 2913249 PCT
Gso3g1341 3 39300250 39306156 Gso10g0276 10 2908006 2913249 PCT
Gso10g0276 10 2908006 2913249 Gso19g1343 19 42130088 42136979 PCT
Gso10g0276 10 2908006 2913249 Gso3g1341 3 39300250 39306156 PCT