Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0275 ATGGCAACCATCTCCGCTGCTATCACAACCCCATCGATCACCCGCGCATGTCTAGTGCAAAAACGTTCTCTTGGGTTCTCATCTCCCGTTCTTGGTTTGCCAGCAATGGGTAAGGTGGGAAGAGTGAGTTGCTCCATGGAGGAAAAGCCTTCTTCTGTGAAGGAAAGCAGCTCAAGCATGTTGGGGATGGGGGCATCTTTGATGGCAGCGGCCAGCGCCGCAGCCATGTCAGGCCCAGCCATGGCCTTGGTGGATGAGAGACTTAGCACTGAAGGAACCGGGCTACCCTTCGGCCTCAGCAACAACCTTCTCGGTTGGATCCTGTTCGGCGTCTTCGGACTCATCTGGGCTCTCTATTTTGTCTACACTTCCTCTCTTGAAGAGGATGAAGAGTCAGGACTGTCCCTTTAA 411 0.5377 MATISAAITTPSITRACLVQKRSLGFSSPVLGLPAMGKVGRVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEEDEESGLSL* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0275 136 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
Gso10g0275 136 Pfam Photosystem II reaction centre W protein (PsbW) 1 136 IPR009806 GO:0009507|GO:0009523|GO:0015979
Gso10g0275 136 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0275 Gso-Chr10 2906050 2907349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0275 K02721 - gmx:100305788 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1173 2 14640690 14642032 Gso10g0275 10 2906050 2907349 GST
Gso19g1342 19 42127794 42129076 Gso10g0275 10 2906050 2907349 PCT
Gso3g1340 3 39298450 39299722 Gso10g0275 10 2906050 2907349 PCT
Gso10g0275 10 2906050 2907349 Gso19g1342 19 42127794 42129076 PCT
Gso10g0275 10 2906050 2907349 Gso3g1340 3 39298450 39299722 PCT