Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02072 ATGTCCATGGCATCGACATCAACACCAGGGTCATCTTCAGAACTAACTATCACAGTTGAACACAATCCTTCCAAATCACGATTATCAGAGCTGGGTATAAATTGGTGGCCCAAATGGGGTTGTCCTCCTGGGAAATTCATGCTCAAATTCGATGCCCAAGAGACGTGTTATTTGCTCAGAGGGAAAGTGAAGGTTTACCCAAAAGGTTCGTCTGAGTTTGTACAATTTGGTGCGGGGGACCTTGTCACCATACCCAAGGGACTTAGTTGCACGTGGGACGTATCCATTGCAGTGGACAAGCATTACAAGTTCGAGTCTTCTTCCACTACACCATCCCCCGAATGA 345 0.4667 MSMASTSTPGSSSELTITVEHNPSKSRLSELGINWWPKWGCPPGKFMLKFDAQETCYLLRGKVKVYPKGSSEFVQFGAGDLVTIPKGLSCTWDVSIAVDKHYKFESSSTTPSPE 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02072 114 Pfam EutQ-like cupin domain 28 102 IPR008579 -
Gma20g02072 114 Gene3D Jelly Rolls 4 104 IPR014710 -
Gma20g02072 114 CDD cupin_TM1112-like 36 104 - -
Gma20g02072 114 SUPERFAMILY RmlC-like cupins 30 95 IPR011051 -
Gma20g02072 114 PANTHER OS04G0445200 PROTEIN 1 111 - -
Gma20g02072 114 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02072 Gma-Chr20 47946078 47946864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02072 - - gmx:100810390 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01725 10 44426117 44426981 Gma20g02072 20 47946078 47946864 GST
Gma16g01677 16 37794005 37795685 Gma20g02072 20 47946078 47946864 PCT
Gma20g02072 20 47946078 47946864 Gma16g01677 16 37794005 37795685 PCT