Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01677 ATGAGTAACGTGACAGAGAAATTGGGCATCAAGATTGAGAGGAACCCTCCTGAAGACAAGCTCACTCAACTTGGTGTTAGGCAATGGCCCAAATGGGGTTGTCCTCCAAGCAAATTCCCGTGGACATATGAATCTAAAGAGACCTGCTATCTCTTGGAAGGAAAAGTGAAGGTTACCCCTAGTGGGGCAAATGAGTCAGTAGAAATTGCTGCTGGTGATTTTGTTGAGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCAGTTGCTGTTGACAAGCACTATAACTTTGAATAA 297 0.4411 MSNVTEKLGIKIERNPPEDKLTQLGVRQWPKWGCPPSKFPWTYESKETCYLLEGKVKVTPSGANESVEIAAGDFVEFPKGMSCTWDVSVAVDKHYNFE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01677 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Gma16g01677 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Gma16g01677 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Gma16g01677 98 CDD cupin_TM1112-like 29 97 - -
Gma16g01677 98 PANTHER OS04G0445200 PROTEIN 3 98 - -
Gma16g01677 98 SUPERFAMILY RmlC-like cupins 19 95 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01677 Gma-Chr16 37794005 37795685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01677 K06995 - gmx:100527331 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01677 16 37794005 37795685 Gma16g01677 16 37794005 37795685 ECH
Gma16g01677 16 37794005 37795685 Gma10g01725 10 44426117 44426981 PCT
Gma16g01677 16 37794005 37795685 Gma20g02072 20 47946078 47946864 PCT
Gma10g01725 10 44426117 44426981 Gma16g01677 16 37794005 37795685 PCT
Gma20g02072 20 47946078 47946864 Gma16g01677 16 37794005 37795685 PCT