Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01725 ATGGCATCATCATTTGTGGGCACTTTATTACCCAACAAGTTCACACAAAACAAACACTTATCATCTGTTCCTGCAAGTAGAGGTGCTCCAACAAGGAGAAGAGTACACTTAGCAACAACAAGAGCAGAGAGCATGACTACTGTCATAGAAAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGCAATGGCCCAAATGGGGTTGCCCTCCAAGCAAGTTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTAGACAAGCACTATAATTTTGAATAA 429 0.4406 MASSFVGTLLPNKFTQNKHLSSVPASRGAPTRRRVHLATTRAESMTTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYNFE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01725 142 PANTHER OS04G0445200 PROTEIN 27 142 - -
Gma10g01725 142 CDD cupin_TM1112-like 73 141 - -
Gma10g01725 142 PANTHER OS04G0445200 PROTEIN 27 142 - -
Gma10g01725 142 Pfam EutQ-like cupin domain 66 139 IPR008579 -
Gma10g01725 142 Gene3D Jelly Rolls 41 141 IPR014710 -
Gma10g01725 142 SUPERFAMILY RmlC-like cupins 61 139 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01725 Gma-Chr10 44426117 44426981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01725 K06995 - gmx:100527470 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01725 10 44426117 44426981 Gma10g01725 10 44426117 44426981 ECH
Gma10g01725 10 44426117 44426981 Gma20g02072 20 47946078 47946864 GST
Gma16g01677 16 37794005 37795685 Gma10g01725 10 44426117 44426981 PCT
Gma10g01725 10 44426117 44426981 Gma16g01677 16 37794005 37795685 PCT