Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01618 ATGAAAATGGCGCGTGGCAAGAATCTGTTCCTCCAAATTCTGTGGTGTTTTTCCTTGATCGGTCTTAGTTCCCAAGCACAGAATTACACTTTTGTTGTGAGAGAGGCCAAGTATACAAGACTCTGCTCCACAAAAAGCATATTGACTGTGAATGGAGAATTTCCCGGACCAACTATTAGAGCCAACAGAGGAGACACAATTTTTATAGATGTttacaacaagggcaacttcaatattactttacactggcatggggtgaagcagccaaggaatccatggacagatggcccttcatacatcactcagtgcccaatccaacctggaaggaaattcacacagaggttgatttttactttcgaggaagggaccatatggtggcatgctcatagtgaatggttaagagccactgtctatggtgctatccacatatatccaaataagaataatccctacccttttCCCCAACCCGATGCAGAGATTCCCATCATATTTGGAGAATGGTGGACGAGTGACGTCAACGAGGTCTTCAGACAATCTATGGAAACTGGAGGAGCCCCAAACGTATCTGATGCTCTCACTATAAATGGTCAACCTGGGGATCTGTTCCCTTGCTCAAGTCCAGAAACGTTCAAGCTAAATGTAGAGCAAGGCAAGACTTATCATCTCCGGGTTATCAACGCGGCACTGAATCTCATTCTCTTCTTCTCTGTTTCCCAACACAACCTCACTGTTGTTGGTGCTGATGCTGTGTACACAAGGCCACTGACAAGGGAATACATTTGCATATCACCGGGACAAGCAATGGATGTGTTGTTGCATGCCAACCAAGATCCTGGTCACTATTATCTGGCTGCAGCGGCATATTCAAGTGGCGTTGGTGTTGCCTTTGATAACACCACAACCACTGCTAGAGTTGAGTACAGTGGCAATTACACTCCACCTTCATCTCCTTCATTGCCTAACCTTCCCAACTTCAACGACACGCGTGCGGCGTTGAACTTCATTACAAACTTGAGAGGCTTACCTGAGAGAGCCCCCAGCCATGTCCCAACAAACATCACAACTCAAATAGTAACCACTATTTCAGTTAACACTTTGCCATGCCCTAATGGCAGAAACGACTGCCAGGGGCTAAATGGAACCATTTTCTCTGCTAGCATGAACAACATAAGCTTTCGAATCCCCACCATTGACATACTAAAAGCCTATTACTACCATATCAACGGGGTATACGAACCTGGATTTCCAACATTTCCACCGTTTATATTTAACTTCACTGGGGATTTTTTGCCTATAACACTGAATACACCAAAGCAAGGGACTAGGGTTAATGTGCTGAACTATGGTGCAACAGTTGAAATTGTTTTCCAAGGGACAAACCTTGTTGGCGGGATAGACCATCCCATCCATCTCCATGGCTACAGTTTCCATGTTGTTGGATATGGGCTAGGCAATTTTAACCAAAGCGTGGATCCCATGAATTTCAATCTCGTTGATCCTCCTTATTTGAATACAGTGATAGTGCCTATAAATGGCTGGGCTGCCATTAGGTTCGAGGCTGTAAACCCTGgagtatggtttatgcactgccatctagaacgccaccaatcttgggGAAGGCGTGTATTGCAAATTTAG 1638 0.3681 MKMARGKNLFLQILWCFSLIGLSSQAQNYTFVVREAKYTRLCSTKSILTVNGEFPGPTIRANRGDTIFIDVYNKGNFNITLHWHGVKQPRNPWTDGPSYITQCPIQPGRKFTQRLIFTFEEGTIWWHAHSEWLRATVYGAIHIYPNKNNPYPFPQPDAEIPIIFGEWWTSDVNEVFRQSMETGGAPNVSDALTINGQPGDLFPCSSPETFKLNVEQGKTYHLRVINAALNLILFFSVSQHNLTVVGADAVYTRPLTREYICISPGQAMDVLLHANQDPGHYYLAAAAYSSGVGVAFDNTTTTARVEYSGNYTPPSSPSLPNLPNFNDTRAALNFITNLRGLPERAPSHVPTNITTQIVTTISVNTLPCPNGRNDCQGLNGTIFSASMNNISFRIPTIDILKAYYYHINGVYEPGFPTFPPFIFNFTGDFLPITLNTPKQGTRVNVLNYGATVEIVFQGTNLVGGIDHPIHLHGYSFHVVGYGLGNFNQSVDPMNFNLVDPPYLNTVIVPINGWAAIRFEAVNPGVWFMHCHLERHQSWGRRVLQI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01618 545 SUPERFAMILY Cupredoxins 377 539 IPR008972 -
Gma20g01618 545 Pfam Multicopper oxidase 160 310 IPR001117 -
Gma20g01618 545 Gene3D - 372 544 IPR008972 -
Gma20g01618 545 TIGRFAM laccase: laccase 25 542 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma20g01618 545 Pfam Multicopper oxidase 434 539 IPR011706 GO:0005507|GO:0016491
Gma20g01618 545 Gene3D - 156 342 IPR008972 -
Gma20g01618 545 SUPERFAMILY Cupredoxins 23 169 IPR008972 -
Gma20g01618 545 CDD CuRO_2_LCC_plant 160 307 IPR034285 -
Gma20g01618 545 PANTHER LACCASE-15 32 542 - -
Gma20g01618 545 PANTHER MULTI-COPPER OXIDASE 32 542 IPR045087 -
Gma20g01618 545 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Gma20g01618 545 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
Gma20g01618 545 SUPERFAMILY Cupredoxins 153 343 IPR008972 -
Gma20g01618 545 Gene3D - 18 145 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01618 Gma-Chr20 43261581 43266007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01618 K05909 K19791 gmx:100788301 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01618 20 43261581 43266007 Gma20g01618 20 43261581 43266007 ECH
Gma10g02098 10 48511308 48514238 Gma20g01618 20 43261581 43266007 GST
Gma16g01442 16 33488331 33491645 Gma20g01618 20 43261581 43266007 PCT
Gma20g01618 20 43261581 43266007 Gma16g01442 16 33488331 33491645 PCT