Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02098 ATGTCGTTCGGCAAGAAACTGTTCCTCCAAATTCTGTGGTGGTTTTCCTTGATCGGTCTTAGTTCCCAAATACGGAGTCATTACAGTTTTGTTGTGAGAGAGGCCAATTATACGAGACTCTGTTCGACAAaaagcatattgacagtgaatggaaattttccaggaccaactatCAAAGTCCACAGAGGAGAAACAATCTTTGTTAATGTTTATAACAAGGGCAACTACAATATCACTTTGCACTGgcatggagtgaagcagccaaggaatccatggacagatggtcctgcatacattactcagtgccctatccaacctggaaggagattcagacagaagttgattttttctacagaggaagggaccatatggtggcatgctcatagtgactggtcaagggccactattcatggggctatctatgtctatccaaccaagaatacaccttacccttttcccaaagctcatgcagagaTTCCCATCATATTTAGTGAATGGTGGAAGAGTGATATTAATGAGGTCTTCACACAATTTATTGAATCTGGAGGAGGTCCAAATATATCTGATGCTCTCACGATAAATGGTCAACCCGGGGATTTGTACCCTTGCTCAATGACAGaaacgttcgagtttcatgtagagcaaggcaggacttatcttctccgtgttgtcaatgcggcaatgaatctcattcttttcttctctgtttcaaaacacaacctcactgttgttggtgctgatggtatgttaaccaagccattgacaagggaatacatttgcatatcaccgggacaaacaatggatgtgttgttgcatgccaaccaagaacctgatcactattatctggctgcaagggcatattcaagtggtgttggtgttgcctttgataacacaacaaccactgctagagtaaagtacagtggtaattacactcctccttcatctccttcattgccTAACCTTCCAGACTTTAACGACACGCCTGCGGTGTTGGACTTCATTACAAGCTTGAGAGGCTTACCTGAGAGATACCCTCGCCAGGTTCCAACAAACATCACAACTCAAATAGTGACCACTATTTCTGTTAACACTTTGCCATGCCCAAATGGCAGAACCTGCCAGGGACCAAATGGAACCATTTTCGCTGCTAGCatgaacaacataagttttgacacccccaacattgacatactaaaagcttattactatcatatcaatggggtatttaaaccgggatttcctagatttccaccctttatatttaacttcactggggattttttgcctataacattgaatataccaaagcaagggactagggttaatgtactgaattatggtgcaacggttgaaattgtattccaagggacaaacgttattgcagggatagaccatcctatgcatctccatggattcagtttccatgttgttggatatgggttaggcaatttcaaccaaagcaaggaccccaagaatttcaatctcgtggatcctccttatttgaatacagtgattgtgcctgtaaatggttgggctgctgttaggtttgtggctaccaaccctg 1564 0.149 MSFGKKLFLQILWWFSLIGLSSQIRSHYSFVVREANYTRLCSTKSILTVNGNFPGPTIKVHRGETIFVNVYNKGNYNITLHWHGVKQPRNPWTDGPAYITQCPIQPGRRFRQKLIFSTEEGTIWWHAHSDWSRATIHGAIYVYPTKNTPYPFPKAHAEIPIIFSEWWKSDINEVFTQFIESGGGPNISDALTINGQPGDLYPCSMTETFEFHVEQGRTYLLRVVNAAMNLILFFSVSKHNLTVVGADGMLTKPLTREYICISPGQTMDVLLHANQEPDHYYLAARAYSSGVGVAFDNTTTTARVKYSGNYTPPSSPSLPNLPDFNDTPAVLDFITSLRGLPERYPRQVPTNITTQIVTTISVNTLPCPNGRTCQGPNGTIFAASMNNISFDTPNIDILKAYYYHINGVFKPGFPRFPPFIFNFTGDFLPITLNIPKQGTRVNVLNYGATVEIVFQGTNVIAGIDHPMHLHGFSFHVVGYGLGNFNQSKDPKNFNLVDPPYLNTVIVPVNGWAAVRFVATNP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02098 521 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Gma10g02098 521 PANTHER MULTI-COPPER OXIDASE 31 521 IPR045087 -
Gma10g02098 521 TIGRFAM laccase: laccase 26 521 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma10g02098 521 Gene3D - 371 521 IPR008972 -
Gma10g02098 521 PANTHER LACCASE-15 31 521 - -
Gma10g02098 521 SUPERFAMILY Cupredoxins 152 341 IPR008972 -
Gma10g02098 521 Gene3D - 154 340 IPR008972 -
Gma10g02098 521 SUPERFAMILY Cupredoxins 335 521 IPR008972 -
Gma10g02098 521 SUPERFAMILY Cupredoxins 24 168 IPR008972 -
Gma10g02098 521 Pfam Multicopper oxidase 433 521 IPR011706 GO:0005507|GO:0016491
Gma10g02098 521 Gene3D - 19 144 IPR008972 -
Gma10g02098 521 CDD CuRO_2_LCC_plant 159 306 IPR034285 -
Gma10g02098 521 Pfam Multicopper oxidase 32 146 IPR011707 GO:0005507
Gma10g02098 521 Pfam Multicopper oxidase 159 309 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02098 Gma-Chr10 48511308 48514238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02098 K05909 K19791 gmx:100817468 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02098 10 48511308 48514238 Gma10g02098 10 48511308 48514238 ECH
Gma10g02098 10 48511308 48514238 Gma20g01618 20 43261581 43266007 GST
Gma16g01442 16 33488331 33491645 Gma10g02098 10 48511308 48514238 PCT
Gma10g02098 10 48511308 48514238 Gma16g01442 16 33488331 33491645 PCT