Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01434 ATGGCAATAGACTGCATAACAAGTATACCCATGATGCCTCAAGCACCACCCCAAGAAACAACCAAAGAACAACAAGAACAGCAGCCACTGGTGTTTGATGCCTCAGTCCTCAGACACCAACTTCACATACCCTCACAATTCATCTGGCCCGATGAGGAGAAAGCATGCTTGGACGAACCCGAGTTGTTGGTCCCATTCATTGACTTGGGAGGGTTCCTCTCTGGTGATCCAGTTGCCGCAGCGGAAGCCTCAAGGCTTGTTGGTGAGGCATGCCAAAAGCATGGCTTTTTTCTGGTTGTGAATCACGGGATTGATCAACGGTTGATATCTGATGCTCATCTTTACATGGAGCACTTCTTTGGTCTTCCCCTGTCTCAGAAACAGAGGGCACAGAGGAAGCCAGGGGAGCACTGTGGTTATGCTAGTAGCTTCACTGGCAGGTTCTCCTCAAAGCTCCCTTGGAAAGAGACACTTTCCTTTCAGTACTCAGCTGACAAAAACTCATCACCAACTCTTGTCAAAGACTACTTGTGCAGTAAAATGGGCAATGAGTTTGAGCAATTTGGGAAAGTTTACCAGGATTACTGTGATGCCATGAGCCGTCTTTCTTTAGGTATAATGGAGCTTCTAGGAATGAGCCTTGGAGTTGGTAGAGCCTGCTTTAGGGAGTTTTTTGAAGAGAATAGTTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTCACTTTGGGCACTGGACCTCATTGTGATCCAACATCTTTGACCATTCTTCACCAGGACCAAGTGGGTGGCTTGCAAGTTTGTGTTGACAATGAGTGGCATTCCATCAAGCCGGATTTCAATGCTTTTGTTGTCAATGTTGGTGATACCTTCATGGCACTTTCAAATGGGAGATACAAGAGTTGCTTGCATAGGGCAGTGGTGAATAGCCAGACAACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAGAAGTGACAAGGTGGTAAGTCCACCATGTGAATTAGTGGACAATTTGGGCCCAAGGCTATACCCTGATTTTACATGGCCAATGCTGCTTGAGTTCACTCAAAAGCATTACCGAGCTGACATGAAAACCCTTGAGGCATTTGCCAACTGGCTGCAACGGAAAAGTAACTGA 1152 0.4592 MAIDCITSIPMMPQAPPQETTKEQQEQQPLVFDASVLRHQLHIPSQFIWPDEEKACLDEPELLVPFIDLGGFLSGDPVAAAEASRLVGEACQKHGFFLVVNHGIDQRLISDAHLYMEHFFGLPLSQKQRAQRKPGEHCGYASSFTGRFSSKLPWKETLSFQYSADKNSSPTLVKDYLCSKMGNEFEQFGKVYQDYCDAMSRLSLGIMELLGMSLGVGRACFREFFEENSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVCVDNEWHSIKPDFNAFVVNVGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLCPRSDKVVSPPCELVDNLGPRLYPDFTWPMLLEFTQKHYRADMKTLEAFANWLQRKSN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01434 383 PANTHER GIBBERELLIN 20-OXIDASE 22 379 - -
Gma20g01434 383 SUPERFAMILY Clavaminate synthase-like 37 367 - -
Gma20g01434 383 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 327 IPR005123 -
Gma20g01434 383 MobiDBLite consensus disorder prediction 13 27 - -
Gma20g01434 383 Gene3D - 34 365 IPR027443 -
Gma20g01434 383 PRINTS Isopenicillin N synthase signature 87 104 - -
Gma20g01434 383 PRINTS Isopenicillin N synthase signature 252 273 - -
Gma20g01434 383 PRINTS Isopenicillin N synthase signature 287 313 - -
Gma20g01434 383 MobiDBLite consensus disorder prediction 1 27 - -
Gma20g01434 383 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 167 IPR026992 -
Gma20g01434 383 Pfam 2OG-Fe(II) oxygenase superfamily 230 327 IPR044861 -
Gma20g01434 383 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 22 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01434 Gma-Chr20 41471503 41473087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01434 41 377 Glycosyltransferase AT5G59530 28.448 4.92e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01434 K05282 - gmx:100816992 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02282 10 50415339 50416954 Gma20g01434 20 41471503 41473087 GST
Gma16g01641 16 37375775 37377591 Gma20g01434 20 41471503 41473087 PCT
Gma09g01430 09 38561745 38563446 Gma20g01434 20 41471503 41473087 PCT
Gma20g01434 20 41471503 41473087 Gma16g01641 16 37375775 37377591 PCT
Gma20g01434 20 41471503 41473087 Gma09g01430 09 38561745 38563446 PCT