Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g02282 ATGGCAATAGACTGCATAACAAGCATACCCATGATGCCTCAACCACCAACCCAAGAAACAACCAAAGAACAAGAACAGCAGCAGCCACTGGTGTTTGATGCCTCAGTCCTCAGACACCAACTTCACATACCCTCACAATTCATCTGGCCCGATGAAGAAAAAGCATGCTTGGACGAACCCGAGTTGTTTGTCCCATTCATTGACTTGGGAGGGTTCCTCTCTGGTGACCCAGTTGCTGCAACGGAAGCCTCGAGGCTTGCTGGTGAAGCATGCCAAAAGCATGGTTTTTTTCTGGTTGTGAATCATGGGATTGATCAACGGTTGATATGTGATGCTCATCTTTACATGGAGCACTTCTTTGGGCTTCCCCTGTCTCAGAAACAGAGGGCTCAGAGGAAGCCAGGGGAGCACTGTGGCTATGCTAGTAGCTTCACTGGAAGGTTCTCCTCTAAGCTCCCTTGGAAAGAGACACTTTCCTTTCAGTACTCAGCTGACAAAAACTCATCACCAGCCCTTGTCAAAGATTACTTGTGCAGTAAAATGGGCAAAGAGTTTGAGCAATTTGGGAAGGTTTACCAGGACTACTGTGATGCCATGAGCAATCTTTCTTTAGGTATAATGGAGCTTCTAGGAATGAGCCTTGGAGTTGGTAGAGCCTGCTTTAGGGAGTTCTTTGAAGAGAATAGTTCAATAATGAGGCTGAATTACTACCCTCCGTGTCAAAAGCCTGACCTCACTTTAGGCACTGGACCTCATTGTGATCCAACATCTTTGACCATTCTTCACCAGGACCAAGTGGGAGGCTTGCAAGTTTGTGTTGACAATGAGTGGCATTCCATTAAGCCGGATCTCAATGCTTTTGTTGTCAATGTTGGTGATACCTTCATGGCTCTTTCGAATGGGAGATACAAGAGTTGCTTGCATAGGGCAGTGGTGAATAGCCAGACAACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAGAAGTGACAAGGTGGTAAGTCCACCATGTGAATTAGTGGACAATTTGAGCCCAAGGCTATACCCAGATTTTACATGGCCCATGCTGCTGGAGTTCACTCAAAAGCATTACAGAGCTGACATGAAAACCCTTGAGGCATTTGCCAACTGGCTCCGGAAAAGTAACTGA 1149 0.4604 MAIDCITSIPMMPQPPTQETTKEQEQQQPLVFDASVLRHQLHIPSQFIWPDEEKACLDEPELFVPFIDLGGFLSGDPVAATEASRLAGEACQKHGFFLVVNHGIDQRLICDAHLYMEHFFGLPLSQKQRAQRKPGEHCGYASSFTGRFSSKLPWKETLSFQYSADKNSSPALVKDYLCSKMGKEFEQFGKVYQDYCDAMSNLSLGIMELLGMSLGVGRACFREFFEENSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVCVDNEWHSIKPDLNAFVVNVGDTFMALSNGRYKSCLHRAVVNSQTTRKSLAFFLCPRSDKVVSPPCELVDNLSPRLYPDFTWPMLLEFTQKHYRADMKTLEAFANWLRKSN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g02282 382 MobiDBLite consensus disorder prediction 1 24 - -
Gma10g02282 382 Pfam 2OG-Fe(II) oxygenase superfamily 230 327 IPR044861 -
Gma10g02282 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 327 IPR005123 -
Gma10g02282 382 SUPERFAMILY Clavaminate synthase-like 37 367 - -
Gma10g02282 382 Gene3D - 34 365 IPR027443 -
Gma10g02282 382 PANTHER GIBBERELLIN 20-OXIDASE 22 379 - -
Gma10g02282 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 167 IPR026992 -
Gma10g02282 382 PRINTS Isopenicillin N synthase signature 87 104 - -
Gma10g02282 382 PRINTS Isopenicillin N synthase signature 252 273 - -
Gma10g02282 382 PRINTS Isopenicillin N synthase signature 287 313 - -
Gma10g02282 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 22 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g02282 Gma-Chr10 50415339 50416954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g02282 41 377 Glycosyltransferase AT5G59530 27.457 6.17e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g02282 K05282 - gmx:100816992 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02282 10 50415339 50416954 Gma10g02282 10 50415339 50416954 ECH
Gma10g02282 10 50415339 50416954 Gma20g01434 20 41471503 41473087 GST
Gma16g01641 16 37375775 37377591 Gma10g02282 10 50415339 50416954 PCT
Gma09g01430 09 38561745 38563446 Gma10g02282 10 50415339 50416954 PCT
Gma10g02282 10 50415339 50416954 Gma16g01641 16 37375775 37377591 PCT
Gma10g02282 10 50415339 50416954 Gma09g01430 09 38561745 38563446 PCT