Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01641 ATGGCCATAGAGTGCATAACAAATATACAATCTATGTCTCAACCACAAAAGCATCACCAAGACCACAAAGAAGATGAAGCACCATTGGTTTTTGATGCCTCACTTCTCAGGCACGAACTCAACCTACCAAAGCAGTTCATTTGGCCAGATGAGGAGAAGCCATGCATGAATGTGCCTGAACTTGCTGTCCCTCTCATTGACTTGGGAGGGTTTATCTCTGGTGACCCTGTTGCGACAATGGAGGCTGCAAGGATGGTTGGTGAGGCATGCCAAAAGCATGGTTTCTTTCTTGTGGTGAACCATGGGATTGATGCCAAGTTAATCTCTCATGCTCATAGCTACATGGATGACTTCTTTGAGATTCCCCTGTCTCAGAAACAGAGGGCGCAGAGAAAAACAGGGGAACACTGTGGTTATGCTAGTAGCTTCACGGGCAGGTTCTCTTCAAAGCTTCCATGGAAAGAGACACTTTCTTTTCAGTACTCAGCTGAGGAAAACTCATCCACTATTGTCAAAGACTACTTGTGCAACACATTGGGGAAGGAGTTTGAGCAATTTGGGAGGGTTTACCAGGACTATTGTGATGCCATGAGTAATCTTTCTTTGGGGATAATGGAACTTTTGGGAATGAGTCTTGGAGTTGGTAAAGCATGTTTTAGTGAGTTCTTTGAAGAGAATAACTCAATAATGAGGCTCAATTACTATCCTCCTTGTCAAAAACCTGACCTCACTTTGGGCACTGGACCTCACTGTGACCCAACATCTTTGACCATTCTTCACCAAGACCAAGTGGGAGGCCTCCAAGTTTTTGTTGACAATGAGTGGCATTCCGTTAGCCCAAATTTCAATGCTTTTGTTGTCAACATAGGTGACACCTTCATGGCTCTTTCAAATGGGAGGTACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGTAGGACCACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTAGTTAGTCCACCAAGTGAATTGGTGGATGATTTGACCCCAAGGGTCTACCCAGATTTTACATGGCCTATGCTGCTTGAGTTTACTCAGAAACATTATAGAGCTGACATCAAAACCCTTGAGGCATTCACCAACTGGCTTCTTCAACGGAAAACGAACTGA 1149 0.4413 MAIECITNIQSMSQPQKHHQDHKEDEAPLVFDASLLRHELNLPKQFIWPDEEKPCMNVPELAVPLIDLGGFISGDPVATMEAARMVGEACQKHGFFLVVNHGIDAKLISHAHSYMDDFFEIPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQYSAEENSSTIVKDYLCNTLGKEFEQFGRVYQDYCDAMSNLSLGIMELLGMSLGVGKACFSEFFEENNSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSVSPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSRTTRKSLAFFLCPKGDKVVSPPSELVDDLTPRVYPDFTWPMLLEFTQKHYRADIKTLEAFTNWLLQRKTN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01641 382 Pfam 2OG-Fe(II) oxygenase superfamily 227 325 IPR044861 -
Gma16g01641 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 225 325 IPR005123 -
Gma16g01641 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 378 - -
Gma16g01641 382 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 378 - -
Gma16g01641 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 167 IPR026992 -
Gma16g01641 382 PRINTS Isopenicillin N synthase signature 86 103 - -
Gma16g01641 382 PRINTS Isopenicillin N synthase signature 250 271 - -
Gma16g01641 382 PRINTS Isopenicillin N synthase signature 285 311 - -
Gma16g01641 382 SUPERFAMILY Clavaminate synthase-like 38 365 - -
Gma16g01641 382 Gene3D - 35 363 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01641 Gma-Chr16 37375775 37377591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01641 42 375 Glycosyltransferase AT5G59530 28.406 1.32e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01641 K05282 - gmx:100305378 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01641 16 37375775 37377591 Gma09g01430 09 38561745 38563446 GST
Gma16g01641 16 37375775 37377591 Gma10g02282 10 50415339 50416954 PCT
Gma16g01641 16 37375775 37377591 Gma20g01434 20 41471503 41473087 PCT
Gma10g02282 10 50415339 50416954 Gma16g01641 16 37375775 37377591 PCT
Gma20g01434 20 41471503 41473087 Gma16g01641 16 37375775 37377591 PCT